Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.9221	Rab4a	RAB4A, member RAS oncogene family	8	8 67.5 cM	19341
Gene Ontology	endosome | GTP binding | protein binding | protein transport | protein transporter activity | regulation of endocytosis | small GTPase mediated signal transduction
Human Homolog	RAB4A[RAB4A, member RAS oncogene family]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC AACGTGAGCG 3.3 0.0033 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma AACGTGAGCG 2.3 0.0023 Cb medulloblastoma AGTTCAAGAC (6) 2.3 0.0023 Cb medulloblastoma CAAGTGTGCC (3) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture AACGTGAGCG 1.1 0.0011 P8 GC+1d culture AGTTCACAGA (3) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture AACGTGAGCG 1.2 0.0012 P8 GC+SHH+1d culture AGTTCACAGA (3) 1.2 0.0012 P8 GC+SHH+1d culture CAAGTGTGCC (3) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex ACAGAACCCT (3) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex AGTTCACAGA (3) 9.1 0.0091 P1 cortex AACGTGAGCG 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus ACAGAACCCT (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina AGTTCAAGAC (6) 3.8 0.0038 E12.5 retina AGTTCACAGA (3) 3.8 0.0038 E12.5 retina AACGTGAGCG 1.9 0.0019 E12.5 retina ACAGAACCCT (3) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina AGTTCACAGA (3) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina AGTTCACAGA (3) 10.9 0.0109 E16.5 retina AACGTGAGCG 3.6 0.0036 E16.5 retina ACAGAACCCT (3) 1.8 0.0018 E16.5 retina CAAGTGTGCC (3) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina AACGTGAGCG 1.8 0.0018 E18.5 retina AGTTCAAGAC (6) 1.8 0.0018 E18.5 retina CAAGTGTGCC (3) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina AACGTGAGCG 3.9 0.0039 P0.5 retina AGTTCACAGA (3) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina AGTTCACAGA (3) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina AGTTCACAGA (3) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina AACGTGAGCG 3.3 0.0033 P6.5 retina AGTTCACAGA (3) 3.3 0.0033 P6.5 retina AGTTCAAGAC (6) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina AACGTGAGCG 13 0.013 P10.5 crx- retina AGTTCACAGA (3) 3.7 0.0037 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina AACGTGAGCG 9.6 0.0096 P10.5 crx+ retina AGTTCACAGA (3) 5.8 0.0058 P10.5 crx+ retina AGTTCAAGAC (6) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal AGTTCACAGA (3) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL AGTTCAAGAC (6) 5.7 0.0057 ONL AACGTGAGCG 1.9 0.0019