Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.9244	Suv39h1	suppressor of variegation 3-9 homolog 1 (Drosophila)	X	X 1.95 cM	20937
Gene Ontology	chromatin | chromatin assembly/disassembly | chromatin binding | chromatin modification | DNA packaging | histone-lysine N-methyltransferase activity | methyltransferase activity | nuclear heterochromatin | nucleus | protein methyltransferase activity | transferase activity | zinc ion binding
Human Homolog	SUV39H1[suppressor of variegation 3-9 homolog 1 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACTGAATCT (3) 37.5 0.0375 P8 Cb GC ACCAAGGCAA (29) 1.6 0.0016 P8 Cb GC GGGCACTCTG (5) 1.6 0.0016 Cb medulloblastoma GACTGAATCT (3) 39.3 0.0393 Cb medulloblastoma ACCAAGGCAA (29) 2.3 0.0023 P8 GC+1d culture GACTGAATCT (3) 29.7 0.0297 P8 GC+1d culture ACCAAGGCAA (29) 3.4 0.0034 P8 GC+1d culture GGGCACTCTG (5) 1.1 0.0011 P8 GC+SHH+1d culture GACTGAATCT (3) 46.8 0.0468 P8 GC+SHH+1d culture ATTTTCTTTT (4) 3.5 0.0035 P8 GC+SHH+1d culture GGGCACTCTG (5) 2.3 0.0023 P8 GC+SHH+1d culture AAGAACTCAA (5) 1.2 0.0012 3T3 fibroblasts GGGCACTCTG (5) 98.1 0.0981 3T3 fibroblasts GACTGAATCT (3) 42.1 0.0421 3T3 fibroblasts TGACAGAAGG (2) 3.5 0.0035 E15 cortex GACTGAATCT (3) 19.8 0.0198 E15 cortex ACCAAGGCAA (29) 4.9 0.0049 P1 cortex GACTGAATCT (3) 22.7 0.0227 P1 cortex GGGCACTCTG (5) 4.5 0.0045 Hypothalamus GACTGAATCT (3) 38 0.038 E12.5 retina GACTGAATCT (3) 54.4 0.0544 E12.5 retina AAGAACTCAA (5) 1.9 0.0019 E12.5 retina GGGCACTCTG (5) 1.9 0.0019 E14.5 retina GACTGAATCT (3) 65.6 0.0656 E14.5 retina ACCAAGGCAA (29) 14.6 0.0146 E16.5 retina GACTGAATCT (3) 47.1 0.0471 E18.5 retina GACTGAATCT (3) 30.9 0.0309 E18.5 retina AAGAACTCAA (5) 1.8 0.0018 E18.5 retina ACCAAGGCAA (29) 1.8 0.0018 P0.5 retina GACTGAATCT (3) 35.3 0.0353 P0.5 retina AAGAACTCAA (5) 3.9 0.0039 P0.5 retina ACCAAGGCAA (29) 3.9 0.0039 P0.5 retina GGGCACTCTG (5) 2 0.002 P2.5 retina GACTGAATCT (3) 37 0.037 P2.5 retina AAGAACTCAA (5) 5.3 0.0053 P2.5 retina ACCAAGGCAA (29) 1.8 0.0018 P2.5 retina GGGCACTCTG (5) 1.8 0.0018 P4.5 retina GACTGAATCT (3) 27.7 0.0277 P4.5 retina AAGAACTCAA (5) 2 0.002 P6.5 retina GACTGAATCT (3) 45 0.045 P6.5 retina AAGAACTCAA (5) 3.3 0.0033 P6.5 retina ACCAAGGCAA (29) 1.7 0.0017 P10.5 crx- retina GACTGAATCT (3) 78 0.078 P10.5 crx+ retina GACTGAATCT (3) 34.6 0.0346 P10.5 crx+ retina AAGAACTCAA (5) 1.9 0.0019 P10.5 crx+ retina ACCAAGGCAA (29) 1.9 0.0019 Adult retinal GACTGAATCT (3) 25.9 0.0259 Adult retinal AAGAACTCAA (5) 3.7 0.0037 Adult retinal ACCAAGGCAA (29) 1.9 0.0019 Adult retinal TGACAGAAGG (2) 1.9 0.0019 ONL GACTGAATCT (3) 21.1 0.0211 ONL ACCAAGGCAA (29) 9.6 0.0096 ONL AAGAACTCAA (5) 1.9 0.0019