Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.9563
1500031M22Rik
RIKEN cDNA 1500031M22 gene
13
66254
Mm.9563
AV111347
expressed sequence AV111347
4
100372
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 60 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGACTACCTG (
3
)
4.9
0.0049
P8 Cb GC
AAATCTAAAT
(
4
)
3.3
0.0033
P8 Cb GC
CATCAGAAGC
(
3
)
3.3
0.0033
P8 Cb GC
GATTCAATGC
(
4
)
3.3
0.0033
P8 Cb GC
TTTCCTTATT
(
7
)
3.3
0.0033
P8 Cb GC
TAAATATTGT (
9
)
1.6
0.0016
Cb medulloblastoma
AGACTACCTG (
3
)
2.3
0.0023
P8 GC+1d culture
AGACTACCTG (
3
)
2.3
0.0023
P8 GC+1d culture
AAATCTAAAT
(
4
)
1.1
0.0011
P8 GC+1d culture
TAAATATTGT (
9
)
1.1
0.0011
P8 GC+1d culture
TTTCCTTATT
(
7
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTCCTTATT
(
7
)
4.7
0.0047
P8 GC+SHH+1d culture
AGACTACCTG (
3
)
3.5
0.0035
P8 GC+SHH+1d culture
AAATCTAAAT
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GAACGGGCCC
(
2
)
1.2
0.0012
P1 cortex
AAATCTAAAT
(
4
)
13.6
0.0136
P1 cortex
AGACTACCTG (
3
)
4.5
0.0045
P1 cortex
TAAATATTGT (
9
)
4.5
0.0045
P1 cortex
TTTCCTTATT
(
7
)
4.5
0.0045
Hypothalamus
AAATCTAAAT
(
4
)
5.4
0.0054
Hypothalamus
TAAATATTGT (
9
)
3.6
0.0036
E12.5 retina
AAATCTAAAT
(
4
)
5.6
0.0056
E12.5 retina
TTTCCTTATT
(
7
)
3.8
0.0038
E12.5 retina
AGACTACCTG (
3
)
1.9
0.0019
E12.5 retina
CATCAGAAGC
(
3
)
1.9
0.0019
E14.5 retina
AGACTACCTG (
3
)
12.8
0.0128
E14.5 retina
AAATCTAAAT
(
4
)
1.8
0.0018
E14.5 retina
TAAATATTGT (
9
)
1.8
0.0018
E14.5 retina
TTTCCTTATT
(
7
)
1.8
0.0018
E16.5 retina
AGACTACCTG (
3
)
9.1
0.0091
E16.5 retina
AAATCTAAAT
(
4
)
3.6
0.0036
E16.5 retina
TTTCCTTATT
(
7
)
1.8
0.0018
E18.5 retina
AGACTACCTG (
3
)
10.9
0.0109
E18.5 retina
AAATCTAAAT
(
4
)
3.6
0.0036
P0.5 retina
AGACTACCTG (
3
)
2
0.002
P0.5 retina
TTTCCTTATT
(
7
)
2
0.002
P2.5 retina
AGACTACCTG (
3
)
5.3
0.0053
P2.5 retina
GATTCAATGC
(
4
)
5.3
0.0053
P2.5 retina
GAACGGGCCC
(
2
)
1.8
0.0018
P2.5 retina
TAAATATTGT (
9
)
1.8
0.0018
P4.5 retina
AGACTACCTG (
3
)
4
0.004
P4.5 retina
TTTCCTTATT
(
7
)
4
0.004
P4.5 retina
GATTCAATGC
(
4
)
2
0.002
P4.5 retina
TAAATATTGT (
9
)
2
0.002
P6.5 retina
TTTCCTTATT
(
7
)
5
0.005
P6.5 retina
AAATCTAAAT
(
4
)
3.3
0.0033
P6.5 retina
AGACTACCTG (
3
)
1.7
0.0017
P6.5 retina
GATTCAATGC
(
4
)
1.7
0.0017
P10.5 crx- retina
AGACTACCTG (
3
)
7.4
0.0074
P10.5 crx- retina
GATTCAATGC
(
4
)
1.9
0.0019
P10.5 crx+ retina
AGACTACCTG (
3
)
5.8
0.0058
P10.5 crx+ retina
GAACGGGCCC
(
2
)
1.9
0.0019
P10.5 crx+ retina
TAAATATTGT (
9
)
1.9
0.0019
P10.5 crx+ retina
TTTCCTTATT
(
7
)
1.9
0.0019
Adult retinal
AGACTACCTG (
3
)
5.6
0.0056
Adult retinal
CATCAGAAGC
(
3
)
1.9
0.0019
ONL
AAATCTAAAT
(
4
)
3.8
0.0038
ONL
AGACTACCTG (
3
)
1.9
0.0019
ONL
GAACGGGCCC
(
2
)
1.9
0.0019
ONL
TTTCCTTATT
(
7
)
1.9
0.0019
