Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.9593
Sh2d3c
SH2 domain containing 3C
2
27387
Mm.9593
6330409D20Rik
RIKEN cDNA 6330409D20 gene
2
70730
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTCTCTTTCA
(
2
)
8.2
0.0082
P8 Cb GC
TTTTCTTTCA
(
4
)
1.6
0.0016
Cb medulloblastoma
TACAGCCACA
(
3
)
6.9
0.0069
P8 GC+1d culture
CTCTCTTTCA
(
2
)
8
0.008
P8 GC+1d culture
TTTCAAGCTT (
3
)
2.3
0.0023
P8 GC+1d culture
TACAGCCACA
(
3
)
1.1
0.0011
P8 GC+1d culture
TCCTCTGCAC (
4
)
1.1
0.0011
P8 GC+1d culture
TTTTCTTTCA
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CTCTCTTTCA
(
2
)
10.5
0.0105
P8 GC+SHH+1d culture
TACAGCCACA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTCAAGCTT (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTTCTTTCA
(
4
)
1.2
0.0012
E15 cortex
TACAGCCACA
(
3
)
4.9
0.0049
P1 cortex
CTCTCTTTCA
(
2
)
4.5
0.0045
P1 cortex
TACAGCCACA
(
3
)
4.5
0.0045
Hypothalamus
CTCTCTTTCA
(
2
)
5.4
0.0054
E12.5 retina
TACAGCCACA
(
3
)
3.8
0.0038
E12.5 retina
AAGAGCTGGA (
7
)
1.9
0.0019
E12.5 retina
TCCTCTGCAC (
4
)
1.9
0.0019
E14.5 retina
CTCTCTTTCA
(
2
)
3.6
0.0036
E16.5 retina
CTCTCTTTCA
(
2
)
3.6
0.0036
P0.5 retina
CTCTCTTTCA
(
2
)
7.9
0.0079
P0.5 retina
AAGAGCTGGA (
7
)
2
0.002
P0.5 retina
TTTCAAGCTT (
3
)
2
0.002
P2.5 retina
CTCTCTTTCA
(
2
)
3.5
0.0035
P2.5 retina
AAGAGCTGGA (
7
)
1.8
0.0018
P4.5 retina
TACAGCCACA
(
3
)
2
0.002
P6.5 retina
CTCTCTTTCA
(
2
)
1.7
0.0017
P6.5 retina
TACAGCCACA
(
3
)
1.7
0.0017
P6.5 retina
TTTCAAGCTT (
3
)
1.7
0.0017
P10.5 crx- retina
CTCTCTTTCA
(
2
)
3.7
0.0037
P10.5 crx- retina
TTTCAAGCTT (
3
)
3.7
0.0037
P10.5 crx- retina
TACAGCCACA
(
3
)
1.9
0.0019
P10.5 crx+ retina
TACAGCCACA
(
3
)
3.8
0.0038
Adult retinal
TTTCAAGCTT (
3
)
3.7
0.0037
Adult retinal
TACAGCCACA
(
3
)
1.9
0.0019
ONL
CTCTCTTTCA
(
2
)
1.9
0.0019
ONL
TACAGCCACA
(
3
)
1.9
0.0019
