Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.96211
2900070H08Rik
RIKEN cDNA 2900070H08 gene
5
73025
Mm.96211
Sri
sorcin
5
5 1.0 cM
109552
Gene Ontology
intracellular
|
plasma membrane
|
protein binding
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 89 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
GCAAAAAAAA (
50
)
14.7
0.0147
P8 Cb GC
CACACACACA (
106
)
11.4
0.0114
P8 Cb GC
ATTCCGAATT (
107
)
1.6
0.0016
P8 Cb GC
CCTTATTTTC
(
6
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
GCAAAAAAAA (
50
)
60.1
0.0601
Cb medulloblastoma
CACACACACA (
106
)
32.4
0.0324
Cb medulloblastoma
CCTTATTTTC
(
6
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
GCAAAAAAAA (
50
)
12.6
0.0126
P8 GC+1d culture
CACACACACA (
106
)
6.8
0.0068
P8 GC+1d culture
CCTTATTTTC
(
6
)
6.8
0.0068
P8 GC+1d culture
ACCGTCTAAC
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
GCAAAAAAAA (
50
)
29.3
0.0293
P8 GC+SHH+1d culture
CACACACACA (
106
)
9.4
0.0094
P8 GC+SHH+1d culture
ACCGTCTAAC
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
ACACACTGGA
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
CCTTATTTTC
(
6
)
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
CACACACACA (
106
)
17.5
0.0175
3T3 fibroblasts
GCAAAAAAAA (
50
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
GCAAAAAAAA (
50
)
9.9
0.0099
E15 cortex
ACACACTGGA
(
4
)
4.9
0.0049
E15 cortex
CACACACACA (
106
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
CACACACACA (
106
)
27.3
0.0273
P1 cortex
GCAAAAAAAA (
50
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
CACACACACA (
106
)
96
0.096
Hypothalamus
GCAAAAAAAA (
50
)
19.9
0.0199
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
GCAAAAAAAA (
50
)
9.4
0.0094
E12.5 retina
CCTTATTTTC
(
6
)
5.6
0.0056
E12.5 retina
CACACACACA (
106
)
3.8
0.0038
E12.5 retina
ACCGTCTAAC
(
3
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
CACACACACA (
106
)
18.2
0.0182
E14.5 retina
GCAAAAAAAA (
50
)
12.8
0.0128
E14.5 retina
ACCGTCTAAC
(
3
)
1.8
0.0018
E14.5 retina
ATCTTTAACA
(
4
)
1.8
0.0018
E14.5 retina
CCTTATTTTC
(
6
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
CACACACACA (
106
)
12.7
0.0127
E16.5 retina
GCAAAAAAAA (
50
)
10.9
0.0109
E16.5 retina
ACCGTCTAAC
(
3
)
5.4
0.0054
E16.5 retina
ACACACTGGA
(
4
)
1.8
0.0018
E16.5 retina
CCTTATTTTC
(
6
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
GCAAAAAAAA (
50
)
25.5
0.0255
E18.5 retina
CACACACACA (
106
)
5.5
0.0055
E18.5 retina
ATCTTTAACA
(
4
)
1.8
0.0018
E18.5 retina
CCTTATTTTC
(
6
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
GCAAAAAAAA (
50
)
17.7
0.0177
P0.5 retina
CACACACACA (
106
)
7.9
0.0079
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
GCAAAAAAAA (
50
)
22.9
0.0229
P2.5 retina
CACACACACA (
106
)
21.1
0.0211
P2.5 retina
ACCGTCTAAC
(
3
)
1.8
0.0018
P2.5 retina
CCTTATTTTC
(
6
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
GCAAAAAAAA (
50
)
25.8
0.0258
P4.5 retina
CACACACACA (
106
)
7.9
0.0079
P4.5 retina
ATTCCGAATT (
107
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
GCAAAAAAAA (
50
)
11.7
0.0117
P6.5 retina
CACACACACA (
106
)
8.3
0.0083
P6.5 retina
ATTCCGAATT (
107
)
3.3
0.0033
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
CACACACACA (
106
)
5.6
0.0056
P10.5 crx- retina
GCAAAAAAAA (
50
)
5.6
0.0056
P10.5 crx- retina
ACACACTGGA
(
4
)
1.9
0.0019
P10.5 crx- retina
ATCTTTAACA
(
4
)
1.9
0.0019
P10.5 crx- retina
CCTTATTTTC
(
6
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
CACACACACA (
106
)
7.7
0.0077
P10.5 crx+ retina
CCTTATTTTC
(
6
)
1.9
0.0019
P10.5 crx+ retina
GCAAAAAAAA (
50
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
CACACACACA (
106
)
16.7
0.0167
Adult retinal
GCAAAAAAAA (
50
)
11.1
0.0111
Adult retinal
ACCGTCTAAC
(
3
)
3.7
0.0037
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
CACACACACA (
106
)
21.1
0.0211
ONL
ATTCCGAATT (
107
)
3.8
0.0038
ONL
GCAAAAAAAA (
50
)
1.9
0.0019
