Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.98	Psmb6	proteasome (prosome, macropain) subunit, beta type 6	11	11 39.0 cM	19175
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | peptidase activity | proteasome core complex (sensu Eukarya) | ubiquitin-dependent protein catabolism
Human Homolog	PSMB6[proteasome (prosome, macropain) subunit, beta type, 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAACGCGACG 24.5 0.0245 P8 Cb GC GCTGTGCAGT (2) 6.5 0.0065 P8 Cb GC GAACGCGACC (3) 3.3 0.0033 Cb medulloblastoma GAACGCGACG 25.4 0.0254 Cb medulloblastoma GAACGCGACC (3) 4.6 0.0046 Cb medulloblastoma CTCTTGCTTT (5) 2.3 0.0023 P8 GC+1d culture GAACGCGACG 19.4 0.0194 P8 GC+1d culture CCTTCCCGAT (2) 4.6 0.0046 P8 GC+1d culture CTCTTGCTTT (5) 1.1 0.0011 P8 GC+1d culture GAACGCGACC (3) 1.1 0.0011 P8 GC+SHH+1d culture GAACGCGACG 17.6 0.0176 P8 GC+SHH+1d culture GAACGCGACC (3) 7 0.007 P8 GC+SHH+1d culture CCTTCCCGAT (2) 1.2 0.0012 3T3 fibroblasts GAACGCGACG 35 0.035 3T3 fibroblasts CCTTCCCGAT (2) 3.5 0.0035 3T3 fibroblasts GAACGCGACC (3) 3.5 0.0035 E15 cortex GAACGCGACG 49.5 0.0495 E15 cortex GAACGCGACC (3) 9.9 0.0099 E15 cortex GCTGTGCAGT (2) 4.9 0.0049 P1 cortex GAACGCGACG 27.3 0.0273 P1 cortex GAACGCGACC (3) 9.1 0.0091 P1 cortex GGAACAGAGT (2) 4.5 0.0045 Hypothalamus GAACGCGACG 9.1 0.0091 Hypothalamus GAACGCGACC (3) 3.6 0.0036 Hypothalamus CCTTCCCGAT (2) 1.8 0.0018 Hypothalamus GGAACAGAGT (2) 1.8 0.0018 E12.5 retina GAACGCGACG 13.1 0.0131 E12.5 retina GAACGCGACC (3) 5.6 0.0056 E12.5 retina CTCTTGCTTT (5) 3.8 0.0038 E12.5 retina GCTGTGCAGT (2) 1.9 0.0019 E14.5 retina GAACGCGACG 25.5 0.0255 E14.5 retina GAACGCGACC (3) 5.5 0.0055 E14.5 retina CCTTCCCGAT (2) 1.8 0.0018 E16.5 retina GAACGCGACG 34.4 0.0344 E16.5 retina GAACGCGACC (3) 9.1 0.0091 E16.5 retina GGAACAGAGT (2) 3.6 0.0036 E16.5 retina CTCTTGCTTT (5) 1.8 0.0018 E18.5 retina GAACGCGACG 18.2 0.0182 E18.5 retina CCTTCCCGAT (2) 1.8 0.0018 P0.5 retina GAACGCGACG 27.5 0.0275 P0.5 retina GAACGCGACC (3) 7.9 0.0079 P0.5 retina CCTTCCCGAT (2) 2 0.002 P0.5 retina CTCTTGCTTT (5) 2 0.002 P0.5 retina GAACCTGACG (3) 2 0.002 P2.5 retina GAACGCGACG 14.1 0.0141 P2.5 retina GGAACAGAGT (2) 3.5 0.0035 P2.5 retina GAACGCGACC (3) 1.8 0.0018 P4.5 retina GAACGCGACG 9.9 0.0099 P4.5 retina GAACGCGACC (3) 4 0.004 P6.5 retina GAACGCGACG 15 0.015 P6.5 retina CCTTCCCGAT (2) 1.7 0.0017 P6.5 retina CTCTTGCTTT (5) 1.7 0.0017 P6.5 retina GAACCTGACG (3) 1.7 0.0017 P10.5 crx- retina GAACGCGACC (3) 7.4 0.0074 P10.5 crx- retina CTCTTGCTTT (5) 3.7 0.0037 P10.5 crx- retina CCTTCCCGAT (2) 1.9 0.0019 P10.5 crx- retina GAACCTGACG (3) 1.9 0.0019 P10.5 crx+ retina GAACGCGACG 17.3 0.0173 P10.5 crx+ retina GAACGCGACC (3) 7.7 0.0077 P10.5 crx+ retina GCTGTGCAGT (2) 3.8 0.0038 P10.5 crx+ retina CCTTCCCGAT (2) 1.9 0.0019 Adult retinal GAACGCGACG 18.5 0.0185 Adult retinal GAACGCGACC (3) 3.7 0.0037 Adult retinal CCTTCCCGAT (2) 1.9 0.0019 Adult retinal CTCTTGCTTT (5) 1.9 0.0019 Adult retinal GAACCTGACG (3) 1.9 0.0019 Adult retinal GGAACAGAGT (2) 1.9 0.0019 ONL GAACGCGACG 7.7 0.0077 ONL CTCTTGCTTT (5) 1.9 0.0019 ONL GAACGCGACC (3) 1.9 0.0019 ONL GCTGTGCAGT (2) 1.9 0.0019