Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.9860
4833420G17Rik
RIKEN cDNA 4833420G17 gene
13
67392
Human Homolog
FLJ32363[FLJ32363 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 59 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTCCCACCTT (
15
)
3.3
0.0033
P8 Cb GC
CAAAAGAAGG (
7
)
1.6
0.0016
P8 Cb GC
GTGCAGAGGA
1.6
0.0016
Cb medulloblastoma
CTCCCACCTT (
15
)
13.9
0.0139
Cb medulloblastoma
CAAAAGAAGG (
7
)
2.3
0.0023
Cb medulloblastoma
GTGCAGAGGA
2.3
0.0023
P8 GC+1d culture
CTCCCACCTT (
15
)
9.1
0.0091
P8 GC+1d culture
GTGCAGAGGA
1.1
0.0011
P8 GC+SHH+1d culture
CTCCCACCTT (
15
)
8.2
0.0082
P8 GC+SHH+1d culture
CAAAAGAAGG (
7
)
4.7
0.0047
P8 GC+SHH+1d culture
AATTTACAGT
2.3
0.0023
P8 GC+SHH+1d culture
GTGCAGAGGA
1.2
0.0012
3T3 fibroblasts
CTCCCACCTT (
15
)
10.5
0.0105
E15 cortex
CTCCCACCTT (
15
)
9.9
0.0099
E15 cortex
GCGCAGGAGG (
5
)
4.9
0.0049
E15 cortex
GTGCAGAGGA
4.9
0.0049
P1 cortex
TAATGAAAAA
(
3
)
4.5
0.0045
Hypothalamus
CTCCCACCTT (
15
)
9.1
0.0091
Hypothalamus
CAAAAGAAGG (
7
)
1.8
0.0018
Hypothalamus
CCCTTTTTTT (
11
)
1.8
0.0018
Hypothalamus
GTGCAGAGGA
1.8
0.0018
E12.5 retina
CTCCCACCTT (
15
)
9.4
0.0094
E12.5 retina
GTGCAGAGGA
3.8
0.0038
E14.5 retina
CTCCCACCTT (
15
)
12.8
0.0128
E14.5 retina
CAAAAGAAGG (
7
)
1.8
0.0018
E14.5 retina
GCGCAGGAGG (
5
)
1.8
0.0018
E16.5 retina
CTCCCACCTT (
15
)
9.1
0.0091
E16.5 retina
GCGCAGGAGG (
5
)
1.8
0.0018
E16.5 retina
GTGCAGAGGA
1.8
0.0018
E16.5 retina
TAATGAAAAA
(
3
)
1.8
0.0018
E18.5 retina
CTCCCACCTT (
15
)
14.6
0.0146
E18.5 retina
CAAAAGAAGG (
7
)
1.8
0.0018
E18.5 retina
GCGCAGGAGG (
5
)
1.8
0.0018
E18.5 retina
GTGCAGAGGA
1.8
0.0018
P0.5 retina
CTCCCACCTT (
15
)
11.8
0.0118
P2.5 retina
CTCCCACCTT (
15
)
15.8
0.0158
P2.5 retina
GTGCAGAGGA
1.8
0.0018
P4.5 retina
CTCCCACCTT (
15
)
37.6
0.0376
P4.5 retina
GTGCAGAGGA
7.9
0.0079
P4.5 retina
CAAAAGAAGG (
7
)
2
0.002
P4.5 retina
TAATGAAAAA
(
3
)
2
0.002
P6.5 retina
CTCCCACCTT (
15
)
20
0.02
P6.5 retina
GTGCAGAGGA
3.3
0.0033
P6.5 retina
CAAAAGAAGG (
7
)
1.7
0.0017
P6.5 retina
CCCTTTTTTT (
11
)
1.7
0.0017
P10.5 crx- retina
CTCCCACCTT (
15
)
13
0.013
P10.5 crx- retina
GTGCAGAGGA
7.4
0.0074
P10.5 crx- retina
CAAAAGAAGG (
7
)
1.9
0.0019
P10.5 crx- retina
GCGCAGGAGG (
5
)
1.9
0.0019
P10.5 crx- retina
TAATGAAAAA
(
3
)
1.9
0.0019
P10.5 crx+ retina
CTCCCACCTT (
15
)
21.1
0.0211
P10.5 crx+ retina
AATTTACAGT
1.9
0.0019
Adult retinal
CTCCCACCTT (
15
)
35.2
0.0352
Adult retinal
TAATGAAAAA
(
3
)
3.7
0.0037
Adult retinal
CAAAAGAAGG (
7
)
1.9
0.0019
Adult retinal
GTGCAGAGGA
1.9
0.0019
ONL
CTCCCACCTT (
15
)
15.3
0.0153
ONL
CAAAAGAAGG (
7
)
1.9
0.0019
ONL
TAATGAAAAA
(
3
)
1.9
0.0019
