Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.9909	C77645	expressed sequence C77645	7		97358
Mm.9909	Hps5	Hermansky-Pudlak syndrome 5 homolog (human)	7	7 25.0 cM	246694
Gene Ontology	organelle organization and biogenesis | protein binding
Human Homolog	HPS5[Hermansky-Pudlak syndrome 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAACTGGATT (2) 3.3 0.0033 P8 Cb GC TACGCAAAAT (5) 1.6 0.0016 Cb medulloblastoma TAACTGGATT (2) 2.3 0.0023 P8 GC+1d culture TAACTGGATT (2) 2.3 0.0023 P8 GC+SHH+1d culture TAACTGGATT (2) 4.7 0.0047 P8 GC+SHH+1d culture CTGCTGCAGC (7) 1.2 0.0012 P8 GC+SHH+1d culture TTCCAGGCTA (2) 1.2 0.0012 3T3 fibroblasts TAACTGGATT (2) 3.5 0.0035 E15 cortex TACGCAAAAT (5) 9.9 0.0099 E15 cortex TAACTGGATT (2) 4.9 0.0049 P1 cortex TAACTGGATT (2) 4.5 0.0045 E12.5 retina TAACTGGATT (2) 1.9 0.0019 E14.5 retina TAACTGGATT (2) 3.6 0.0036 E14.5 retina CTGCTGCAGC (7) 1.8 0.0018 E14.5 retina TACGCAAAAT (5) 1.8 0.0018 E16.5 retina TAACTGGATT (2) 3.6 0.0036 E18.5 retina TAACTGGATT (2) 1.8 0.0018 E18.5 retina TTCCAGGCTA (2) 1.8 0.0018 P0.5 retina TAACTGGATT (2) 2 0.002 P0.5 retina TACGCAAAAT (5) 2 0.002 P0.5 retina TTCCAGGCTA (2) 2 0.002 P2.5 retina TAACTGGATT (2) 8.8 0.0088 P2.5 retina CTGCTGCAGC (7) 1.8 0.0018 P2.5 retina TACGCAAAAT (5) 1.8 0.0018 P2.5 retina TTCCAGGCTA (2) 1.8 0.0018 P4.5 retina TAACTGGATT (2) 7.9 0.0079 P4.5 retina CTGCTGCAGC (7) 2 0.002 P4.5 retina TACGCAAAAT (5) 2 0.002 P4.5 retina TTCCAGGCTA (2) 2 0.002 P6.5 retina TAACTGGATT (2) 5 0.005 P10.5 crx- retina TAACTGGATT (2) 1.9 0.0019 P10.5 crx- retina TACGCAAAAT (5) 1.9 0.0019 P10.5 crx+ retina TAACTGGATT (2) 1.9 0.0019 Adult retinal TAACTGGATT (2) 1.9 0.0019 Adult retinal TACGCAAAAT (5) 1.9 0.0019 ONL TTCCAGGCTA (2) 1.9 0.0019