Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.99113	C530040J15Rik	RIKEN cDNA C530040J15 gene	6		319356
Mm.99113	Smarcad1	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1`	6	6 29.69 cM	13990
Gene Ontology	ATP binding | ATP dependent helicase activity | DNA binding | helicase activity | hydrolase activity | nucleic acid binding | nucleus
Human Homolog	SMARCAD1[SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAATAGGTC (3) 3.3 0.0033 P8 Cb GC TGGTTGCTGA (15) 3.3 0.0033 P8 Cb GC TGGCTGGAAT (4) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGA (15) 2.3 0.0023 P8 GC+1d culture AAAATAGGTC (3) 1.1 0.0011 P8 GC+SHH+1d culture CTTCCCCCAG (11) 3.5 0.0035 P8 GC+SHH+1d culture TGGTTGCTGA (15) 2.3 0.0023 P8 GC+SHH+1d culture AAAATAGGTC (3) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGA (15) 7 0.007 E15 cortex TGGTTGCTGA (15) 4.9 0.0049 Hypothalamus TGGTTGCTGA (15) 1.8 0.0018 E12.5 retina AAAATAGGTC (3) 1.9 0.0019 E12.5 retina TGGTTGCTGA (15) 1.9 0.0019 E14.5 retina TGGTTGCTGA (15) 21.9 0.0219 E14.5 retina AAAATAGGTC (3) 1.8 0.0018 E14.5 retina CTTCCCCCAG (11) 1.8 0.0018 E16.5 retina TGGTTGCTGA (15) 19.9 0.0199 E16.5 retina CTTCCCCCAG (11) 1.8 0.0018 E18.5 retina TGGTTGCTGA (15) 1.8 0.0018 P0.5 retina TGGTTGCTGA (15) 2 0.002 P2.5 retina AAAATAGGTC (3) 1.8 0.0018 P2.5 retina TGGTTGCTGA (15) 1.8 0.0018 P4.5 retina TGGTTGCTGA (15) 5.9 0.0059 P4.5 retina TGGCTGGAAT (4) 2 0.002 P6.5 retina TGGTTGCTGA (15) 8.3 0.0083 P6.5 retina AAAATAGGTC (3) 1.7 0.0017 P6.5 retina CTTCCCCCAG (11) 1.7 0.0017 P6.5 retina TGGCTGGAAT (4) 1.7 0.0017 P10.5 crx- retina CTGAATCACA (2) 1.9 0.0019 P10.5 crx- retina TGGCTGGAAT (4) 1.9 0.0019 P10.5 crx- retina TGGTTGCTGA (15) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGA (15) 3.8 0.0038 Adult retinal CTGAATCACA (2) 3.7 0.0037 Adult retinal CTTCCCCCAG (11) 1.9 0.0019 Adult retinal TGGTTGCTGA (15) 1.9 0.0019 ONL TGGTTGCTGA (15) 11.5 0.0115