Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.99793
1110007C24Rik
RIKEN cDNA 1110007C24 gene
4
4 65.69 cM
66146
Gene Ontology
nucleus
Human Homolog
FLJ10747[hypothetical protein FLJ10747]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
GAAAATTGTC
(
5
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
GAAAATTGTC
(
5
)
5.7
0.0057
P8 GC+1d culture
CCCAGCATAA
(
2
)
1.1
0.0011
P8 GC+1d culture
GGAAGCAGAC (
3
)
1.1
0.0011
P8 GC+1d culture
GGAAGCAGCC
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
GAAAATTGTC
(
5
)
7
0.007
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
GAAAATTGTC
(
5
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
GAAAATTGTC
(
5
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
GGAAGCAGAC (
3
)
7.2
0.0072
Hypothalamus
GAAAATTGTC
(
5
)
3.6
0.0036
Hypothalamus
GGAAGCAGCC
(
2
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
GAAAATTGTC
(
5
)
3.6
0.0036
E14.5 retina
GGAAGCAGAC (
3
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
GGAAGCAGAC (
3
)
3.6
0.0036
E16.5 retina
GAAAATTGTC
(
5
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
GAAAATTGTC
(
5
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
GAAAATTGTC
(
5
)
1.8
0.0018
P2.5 retina
GGAAGCAGAC (
3
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
GAAAATTGTC
(
5
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
GAAAATTGTC
(
5
)
1.9
0.0019
P10.5 crx- retina
GGAAGCAGAC (
3
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
CCCAGCATAA
(
2
)
3.7
0.0037
Adult retinal
GGAAGCAGAC (
3
)
3.7
0.0037
Adult retinal
GAAAATTGTC
(
5
)
1.9
0.0019
Adult retinal
GGAAGCAGCC
(
2
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
GGAAGCAGAC (
3
)
7.7
0.0077
ONL
GAAAATTGTC
(
5
)
1.9
0.0019
