Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.105331
A930007D18Rik
RIKEN cDNA A930007D18 gene
4
77789
Mm.105331
Psip1
PC4 and SFRS1 interacting protein 1
4
101739
Mm.105331
E030018J20Rik
RIKEN cDNA E030018J20 gene
4
319879
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 87 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTTGGTCTGT
(
4
)
11.4
0.0114
P8 Cb GC
AGACTGCTTT
(
3
)
3.3
0.0033
P8 Cb GC
GTTATTGATG
(
4
)
3.3
0.0033
P8 Cb GC
TAATCTACAG
(
3
)
3.3
0.0033
P8 Cb GC
TCACAGGTGT
(
5
)
3.3
0.0033
Cb medulloblastoma
GTTGGTCTGT
(
4
)
9.2
0.0092
P8 GC+1d culture
GTTGGTCTGT
(
4
)
16
0.016
P8 GC+1d culture
TAATCTACAG
(
3
)
10.3
0.0103
P8 GC+1d culture
TCACAGGTGT
(
5
)
3.4
0.0034
P8 GC+1d culture
GATTGATTCT
(
4
)
1.1
0.0011
P8 GC+1d culture
GTTATTGATG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GTTGGTCTGT
(
4
)
19.9
0.0199
P8 GC+SHH+1d culture
TCACAGGTGT
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
AGAAAGAAGC
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GTTATTGATG
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
TAATCTACAG
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TATGTTCCTG
(
3
)
1.2
0.0012
3T3 fibroblasts
GTTGGTCTGT
(
4
)
10.5
0.0105
E15 cortex
AGAAAGAAGC
(
3
)
9.9
0.0099
E15 cortex
GTTGGTCTGT
(
4
)
9.9
0.0099
E15 cortex
GTTATTGATG
(
4
)
4.9
0.0049
P1 cortex
GTTATTGATG
(
4
)
22.7
0.0227
P1 cortex
GTTGGTCTGT
(
4
)
9.1
0.0091
P1 cortex
TAATCTACAG
(
3
)
4.5
0.0045
Hypothalamus
GTTGGTCTGT
(
4
)
3.6
0.0036
Hypothalamus
TAATCTACAG
(
3
)
1.8
0.0018
Hypothalamus
TAGACCAGGT
(
3
)
1.8
0.0018
E12.5 retina
GTTGGTCTGT
(
4
)
5.6
0.0056
E12.5 retina
GTAAGTTCCA
(
3
)
1.9
0.0019
E12.5 retina
GTTATTGATG
(
4
)
1.9
0.0019
E12.5 retina
TAATCTACAG
(
3
)
1.9
0.0019
E12.5 retina
TCACAGGTGT
(
5
)
1.9
0.0019
E14.5 retina
GTTATTGATG
(
4
)
3.6
0.0036
E14.5 retina
GTTGGTCTGT
(
4
)
3.6
0.0036
E14.5 retina
ACCTACTCAG
(
3
)
1.8
0.0018
E14.5 retina
AGAAAGAAGC
(
3
)
1.8
0.0018
E14.5 retina
AGACTGCTTT
(
3
)
1.8
0.0018
E14.5 retina
GATTGATTCT
(
4
)
1.8
0.0018
E14.5 retina
GTAAGTTCCA
(
3
)
1.8
0.0018
E14.5 retina
TCACAGGTGT
(
5
)
1.8
0.0018
E16.5 retina
GTTGGTCTGT
(
4
)
7.2
0.0072
E16.5 retina
TAATCTACAG
(
3
)
5.4
0.0054
E16.5 retina
TCACCGTCTG
(
3
)
5.4
0.0054
E16.5 retina
AGAAAGAAGC
(
3
)
1.8
0.0018
E16.5 retina
AGACTGCTTT
(
3
)
1.8
0.0018
E16.5 retina
TCACAGGTGT
(
5
)
1.8
0.0018
E18.5 retina
GTTGGTCTGT
(
4
)
9.1
0.0091
E18.5 retina
GTTATTGATG
(
4
)
3.6
0.0036
E18.5 retina
TAATCTACAG
(
3
)
3.6
0.0036
E18.5 retina
TCACAGGTGT
(
5
)
3.6
0.0036
E18.5 retina
AGAAAGAAGC
(
3
)
1.8
0.0018
E18.5 retina
GATTGATTCT
(
4
)
1.8
0.0018
P0.5 retina
GTTGGTCTGT
(
4
)
13.7
0.0137
P0.5 retina
TCACAGGTGT
(
5
)
13.7
0.0137
P0.5 retina
GTTATTGATG
(
4
)
9.8
0.0098
P0.5 retina
TAATCTACAG
(
3
)
7.9
0.0079
P0.5 retina
GATTGATTCT
(
4
)
2
0.002
P2.5 retina
GTTATTGATG
(
4
)
12.3
0.0123
P2.5 retina
GTTGGTCTGT
(
4
)
5.3
0.0053
P2.5 retina
GATTGATTCT
(
4
)
3.5
0.0035
P2.5 retina
TAATCTACAG
(
3
)
1.8
0.0018
P2.5 retina
TATGTTCCTG
(
3
)
1.8
0.0018
P4.5 retina
GTTGGTCTGT
(
4
)
7.9
0.0079
P4.5 retina
TCACAGGTGT
(
5
)
5.9
0.0059
P4.5 retina
TATGTTCCTG
(
3
)
4
0.004
P4.5 retina
TAATCTACAG
(
3
)
2
0.002
P6.5 retina
TCACAGGTGT
(
5
)
6.7
0.0067
P6.5 retina
TAATCTACAG
(
3
)
5
0.005
P6.5 retina
GTAAGTTCCA
(
3
)
1.7
0.0017
P6.5 retina
GTTGGTCTGT
(
4
)
1.7
0.0017
P6.5 retina
TATGTTCCTG
(
3
)
1.7
0.0017
P10.5 crx- retina
GTTGGTCTGT
(
4
)
5.6
0.0056
P10.5 crx- retina
TAATCTACAG
(
3
)
5.6
0.0056
P10.5 crx- retina
TCACAGGTGT
(
5
)
3.7
0.0037
P10.5 crx- retina
AGAAAGAAGC
(
3
)
1.9
0.0019
P10.5 crx+ retina
TCACAGGTGT
(
5
)
7.7
0.0077
P10.5 crx+ retina
GTTGGTCTGT
(
4
)
5.8
0.0058
P10.5 crx+ retina
GTTATTGATG
(
4
)
1.9
0.0019
P10.5 crx+ retina
TAATCTACAG
(
3
)
1.9
0.0019
Adult retinal
TAATCTACAG
(
3
)
9.3
0.0093
Adult retinal
GTTGGTCTGT
(
4
)
5.6
0.0056
Adult retinal
TCACAGGTGT
(
5
)
3.7
0.0037
Adult retinal
GATTGATTCT
(
4
)
1.9
0.0019
ONL
ACCTACTCAG
(
3
)
3.8
0.0038
ONL
GTTGGTCTGT
(
4
)
3.8
0.0038
ONL
TAATCTACAG
(
3
)
1.9
0.0019
ONL
TAGACCAGGT
(
3
)
1.9
0.0019
