Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.126534	BB172097	expressed sequence BB172097	18		107067
Mm.126534	C030040K24Rik	RIKEN cDNA C030040K24 gene	18		77479
Mm.126534	A230062I15Rik	RIKEN cDNA A230062I15 gene	18		320636
Mm.126534	Paip2	polyadenylate-binding protein-interacting protein 2	18		67869
Gene Ontology	cytoplasm | regulation of protein biosynthesis | regulation of translation | translation repressor activity, nucleic acid binding
Human Homolog	PAIP2[poly(A) binding protein interacting protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTATAGTCT (4) 11.4 0.0114 P8 Cb GC CTTAAATAAA (5) 6.5 0.0065 Cb medulloblastoma ACTATAGTCT (4) 9.2 0.0092 Cb medulloblastoma CTTAAATAAA (5) 6.9 0.0069 Cb medulloblastoma CTTAATAAAA (6) 4.6 0.0046 P8 GC+1d culture CTTAAATAAA (5) 28.5 0.0285 P8 GC+1d culture ACTATAGTCT (4) 11.4 0.0114 P8 GC+1d culture CTTAATAAAA (6) 6.8 0.0068 P8 GC+SHH+1d culture CTTAAATAAA (5) 34 0.034 P8 GC+SHH+1d culture ACTATAGTCT (4) 4.7 0.0047 P8 GC+SHH+1d culture CTTAATAAAA (6) 2.3 0.0023 P8 GC+SHH+1d culture TCTGAGCAGC (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTGAAGTCT (6) 1.2 0.0012 3T3 fibroblasts ACTATAGTCT (4) 3.5 0.0035 E15 cortex ACTATAGTCT (4) 4.9 0.0049 P1 cortex CTTAATAAAA (6) 9.1 0.0091 Hypothalamus ACTATAGTCT (4) 3.6 0.0036 Hypothalamus CTTAATAAAA (6) 3.6 0.0036 Hypothalamus TGTGAAGTCT (6) 1.8 0.0018 E12.5 retina CTTAATAAAA (6) 5.6 0.0056 E12.5 retina ACTATAGTCT (4) 3.8 0.0038 E12.5 retina CTTAAATAAA (5) 1.9 0.0019 E14.5 retina ACTATAGTCT (4) 9.1 0.0091 E14.5 retina CTTAAATAAA (5) 1.8 0.0018 E14.5 retina CTTAATAAAA (6) 1.8 0.0018 E16.5 retina ACTATAGTCT (4) 12.7 0.0127 E16.5 retina CTTAATAAAA (6) 10.9 0.0109 E16.5 retina CTTAAATAAA (5) 7.2 0.0072 E16.5 retina TGTGAAGTCT (6) 5.4 0.0054 E16.5 retina TGGATGGAAA (5) 1.8 0.0018 E16.5 retina TTCTTCTTCC (5) 1.8 0.0018 E18.5 retina CTTAAATAAA (5) 5.5 0.0055 E18.5 retina CTTAATAAAA (6) 3.6 0.0036 E18.5 retina ACTATAGTCT (4) 1.8 0.0018 P0.5 retina ACTATAGTCT (4) 11.8 0.0118 P0.5 retina CTTAAATAAA (5) 3.9 0.0039 P0.5 retina CTTAATAAAA (6) 2 0.002 P2.5 retina CTTAAATAAA (5) 8.8 0.0088 P2.5 retina TGGATGGAAA (5) 3.5 0.0035 P2.5 retina CTTAATAAAA (6) 1.8 0.0018 P2.5 retina TCTGAGCAGC (4) 1.8 0.0018 P4.5 retina CTTAATAAAA (6) 11.9 0.0119 P4.5 retina CTTAAATAAA (5) 7.9 0.0079 P4.5 retina TCTGAGCAGC (4) 2 0.002 P6.5 retina CTTAAATAAA (5) 6.7 0.0067 P6.5 retina ACTATAGTCT (4) 5 0.005 P6.5 retina CTTAATAAAA (6) 3.3 0.0033 P10.5 crx- retina ACTATAGTCT (4) 26 0.026 P10.5 crx- retina CTTAAATAAA (5) 5.6 0.0056 P10.5 crx- retina CTTAATAAAA (6) 3.7 0.0037 P10.5 crx+ retina CTTAAATAAA (5) 7.7 0.0077 P10.5 crx+ retina ACTATAGTCT (4) 5.8 0.0058 P10.5 crx+ retina CTTAATAAAA (6) 3.8 0.0038 P10.5 crx+ retina TTCTTCTTCC (5) 1.9 0.0019 Adult retinal CTTAATAAAA (6) 3.7 0.0037 Adult retinal ACTATAGTCT (4) 1.9 0.0019 Adult retinal CTTAAATAAA (5) 1.9 0.0019 Adult retinal TTCTTCTTCC (5) 1.9 0.0019 ONL ACTATAGTCT (4) 3.8 0.0038 ONL CTTAAATAAA (5) 3.8 0.0038