Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.12787
AW822050
expressed sequence AW822050
17
106830
Mm.12787
2400010G15Rik
RIKEN cDNA 2400010G15 gene
17
76483
Mm.12787
2610529L02Rik
RIKEN cDNA 2610529L02 gene
17
72527
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CGCCCAGACA
(
4
)
13.1
0.0131
P8 Cb GC
GCTTCTGGGG
(
3
)
1.6
0.0016
Cb medulloblastoma
CGCCCAGACA
(
4
)
18.5
0.0185
P8 GC+1d culture
CGCCCAGACA
(
4
)
14.8
0.0148
P8 GC+1d culture
CCTCATCTCG
(
3
)
1.1
0.0011
P8 GC+1d culture
GATCCTGCCA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CGCCCAGACA
(
4
)
11.7
0.0117
P8 GC+SHH+1d culture
CCTCATCTCG
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GATCCTGCCA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGGGTCCAC
(
3
)
1.2
0.0012
3T3 fibroblasts
CGCCCAGACA
(
4
)
17.5
0.0175
3T3 fibroblasts
CCTCATCTCG
(
3
)
3.5
0.0035
3T3 fibroblasts
GTGGGTCCAC
(
3
)
3.5
0.0035
E15 cortex
GCTTCTGGGG
(
3
)
4.9
0.0049
E15 cortex
GTGGGTCCAC
(
3
)
4.9
0.0049
P1 cortex
CGCCCAGACA
(
4
)
9.1
0.0091
Hypothalamus
CGCCCAGACA
(
4
)
7.2
0.0072
Hypothalamus
GTGGGTCCAC
(
3
)
1.8
0.0018
E12.5 retina
CGCCCAGACA
(
4
)
5.6
0.0056
E14.5 retina
CGCCCAGACA
(
4
)
7.3
0.0073
E14.5 retina
GATCCTGCCA
(
3
)
1.8
0.0018
E16.5 retina
CGCCCAGACA
(
4
)
5.4
0.0054
E18.5 retina
CGCCCAGACA
(
4
)
5.5
0.0055
P0.5 retina
CGCCCAGACA
(
4
)
5.9
0.0059
P0.5 retina
CCTCATCTCG
(
3
)
2
0.002
P2.5 retina
CGCCCAGACA
(
4
)
7
0.007
P2.5 retina
GTGGGTCCAC
(
3
)
5.3
0.0053
P4.5 retina
CGCCCAGACA
(
4
)
11.9
0.0119
P4.5 retina
GTGGGTCCAC
(
3
)
2
0.002
P6.5 retina
CGCCCAGACA
(
4
)
3.3
0.0033
P6.5 retina
GATCCTGCCA
(
3
)
1.7
0.0017
P6.5 retina
GCTTCTGGGG
(
3
)
1.7
0.0017
P6.5 retina
GTGGGTCCAC
(
3
)
1.7
0.0017
P10.5 crx- retina
CGCCCAGACA
(
4
)
18.6
0.0186
P10.5 crx- retina
GTGGGTCCAC
(
3
)
1.9
0.0019
P10.5 crx+ retina
CGCCCAGACA
(
4
)
11.5
0.0115
P10.5 crx+ retina
GTGGGTCCAC
(
3
)
3.8
0.0038
P10.5 crx+ retina
GATCCTGCCA
(
3
)
1.9
0.0019
Adult retinal
CGCCCAGACA
(
4
)
1.9
0.0019
ONL
CGCCCAGACA
(
4
)
3.8
0.0038
ONL
CCTCATCTCG
(
3
)
1.9
0.0019
