Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.129481	Nr3c1	nuclear receptor subfamily 3, group C, member 1	18	18 20.0 cM	14815
Gene Ontology	DNA binding | glucocorticoid receptor activity | ligand-dependent nuclear receptor activity | nucleus | protein binding | receptor activity | regulation of transcription, DNA-dependent | steroid binding | steroid hormone receptor activity | transcription factor activity
Human Homolog	NR3C1[nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 28 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCCATAGAA (2) 6.5 0.0065 P8 Cb GC CTGAATAACC 1.6 0.0016 P8 Cb GC TTTATGTTTT (3) 1.6 0.0016 Cb medulloblastoma CTGAATAACC 4.6 0.0046 Cb medulloblastoma TGCCATAGAA (2) 4.6 0.0046 P8 GC+1d culture TGCCATAGAA (2) 5.7 0.0057 P8 GC+1d culture CTGAATAACC 1.1 0.0011 P8 GC+1d culture TTTATGTTTT (3) 1.1 0.0011 P8 GC+SHH+1d culture TGCCATAGAA (2) 10.5 0.0105 P8 GC+SHH+1d culture CTGAATAACC 3.5 0.0035 P8 GC+SHH+1d culture TTTATGTTTT (3) 2.3 0.0023 Hypothalamus TGCCATAGAA (2) 12.7 0.0127 E14.5 retina TTTATGTTTT (3) 1.8 0.0018 E18.5 retina CTGAATAACC 1.8 0.0018 E18.5 retina TGCCATAGAA (2) 1.8 0.0018 P0.5 retina CTGAATAACC 2 0.002 P0.5 retina TTTATGTTTT (3) 2 0.002 P2.5 retina TGCCATAGAA (2) 3.5 0.0035 P2.5 retina CTGAATAACC 1.8 0.0018 P4.5 retina CTGAATAACC 2 0.002 P6.5 retina TGCCATAGAA (2) 3.3 0.0033 P6.5 retina CTGAATAACC 1.7 0.0017 P10.5 crx- retina CTGAATAACC 1.9 0.0019 P10.5 crx- retina TGCCATAGAA (2) 1.9 0.0019 P10.5 crx+ retina CTGAATAACC 1.9 0.0019 Adult retinal CTGAATAACC 1.9 0.0019 Adult retinal TGCCATAGAA (2) 1.9 0.0019 ONL CTGAATAACC 1.9 0.0019