Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.130721
D6Mgi14
DNA Segment, Chr 6, Mouse Genome Informatics 14
6
101378
Mm.130721
5730601F06Rik
RIKEN cDNA 5730601F06 gene
9
77519
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 10 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TACCTTTTCT
(
2
)
3.3
0.0033
P8 Cb GC
TGTAAAGCCC
(
3
)
1.6
0.0016
P8 Cb GC
TGTTTAAGTG
(
2
)
1.6
0.0016
Cb medulloblastoma
TACCTTTTCT
(
2
)
6.9
0.0069
Cb medulloblastoma
TTGCCTCACA
(
2
)
2.3
0.0023
P8 GC+1d culture
TACCTTTTCT
(
2
)
5.7
0.0057
P8 GC+1d culture
TAGAAGTAGA
(
2
)
4.6
0.0046
P8 GC+1d culture
AATTTGAGAG
(
2
)
1.1
0.0011
P8 GC+1d culture
TAAAAACTCA
(
2
)
1.1
0.0011
P8 GC+1d culture
TGTAAAGCCC
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TACCTTTTCT
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TGTTTAAGTG
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
AATTTGAGAG
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TGTAAAGCCC
(
3
)
1.2
0.0012
3T3 fibroblasts
TTGCCTCACA
(
2
)
3.5
0.0035
E15 cortex
TACCTTTTCT
(
2
)
4.9
0.0049
P1 cortex
TAGAAGTAGA
(
2
)
9.1
0.0091
P1 cortex
TACCTTTTCT
(
2
)
4.5
0.0045
Hypothalamus
TACCTTTTCT
(
2
)
1.8
0.0018
E12.5 retina
AATTTGAGAG
(
2
)
1.9
0.0019
E12.5 retina
TAGAAGTAGA
(
2
)
1.9
0.0019
E12.5 retina
TGTAAAGCCC
(
3
)
1.9
0.0019
E16.5 retina
TAAAAACTCA
(
2
)
3.6
0.0036
E16.5 retina
TACATACCTG
(
2
)
3.6
0.0036
E16.5 retina
TACCTTTTCT
(
2
)
3.6
0.0036
E18.5 retina
TACCTTTTCT
(
2
)
5.5
0.0055
E18.5 retina
TGTTTAAGTG
(
2
)
1.8
0.0018
P0.5 retina
TACCTTTTCT
(
2
)
3.9
0.0039
P0.5 retina
TAGAAGTAGA
(
2
)
2
0.002
P2.5 retina
TACCTTTTCT
(
2
)
14.1
0.0141
P2.5 retina
TAGAAGTAGA
(
2
)
5.3
0.0053
P2.5 retina
TACATACCTG
(
2
)
3.5
0.0035
P2.5 retina
TGTTTAAGTG
(
2
)
1.8
0.0018
P4.5 retina
TACCTTTTCT
(
2
)
5.9
0.0059
P4.5 retina
TAGAAGTAGA
(
2
)
4
0.004
P4.5 retina
AATTTGAGAG
(
2
)
2
0.002
P6.5 retina
TACCTTTTCT
(
2
)
5
0.005
P6.5 retina
TGTAAAGCCC
(
3
)
3.3
0.0033
P6.5 retina
AATTTGAGAG
(
2
)
1.7
0.0017
P6.5 retina
TAGAAGTAGA
(
2
)
1.7
0.0017
P6.5 retina
TGTTTAAGTG
(
2
)
1.7
0.0017
P6.5 retina
TTGCCTCACA
(
2
)
1.7
0.0017
P10.5 crx- retina
TACCTTTTCT
(
2
)
3.7
0.0037
P10.5 crx- retina
TAAAAACTCA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TACATACCTG
(
2
)
1.9
0.0019
P10.5 crx+ retina
TACCTTTTCT
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGTTTAAGTG
(
2
)
1.9
0.0019
Adult retinal
TGTAAAGCCC
(
3
)
3.7
0.0037
ONL
AATTTGAGAG
(
2
)
1.9
0.0019
ONL
TAGAAGTAGA
(
2
)
1.9
0.0019
ONL
TGTAAAGCCC
(
3
)
1.9
0.0019
