Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.131408	Mecp2	methyl CpG binding protein 2	X	X 29.6 cM	17257
Gene Ontology	heterochromatin | methyl-CpG binding | negative regulation of transcription | nucleus
Human Homolog	MECP2[methyl CpG binding protein 2 (Rett syndrome)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 24 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTAACTGCA (3) 1.6 0.0016 Cb medulloblastoma AGTAACTGCA (3) 4.6 0.0046 Cb medulloblastoma CCTTTCTAAG (2) 2.3 0.0023 P8 GC+1d culture CCTTTCTAAG (2) 2.3 0.0023 P8 GC+1d culture AGTAACTGCA (3) 1.1 0.0011 P8 GC+1d culture TTGTACTCCC 1.1 0.0011 P8 GC+SHH+1d culture CCAGAGCCAA 1.2 0.0012 P8 GC+SHH+1d culture TTGTACTCCC 1.2 0.0012 3T3 fibroblasts AGTAACTGCA (3) 3.5 0.0035 P1 cortex AGTAACTGCA (3) 4.5 0.0045 E12.5 retina AGTAACTGCA (3) 3.8 0.0038 E16.5 retina AGTAACTGCA (3) 3.6 0.0036 E16.5 retina CCTTTCTAAG (2) 1.8 0.0018 P0.5 retina AGTAACTGCA (3) 2 0.002 P0.5 retina CCAGAGCCAA 2 0.002 P4.5 retina CCTTTCTAAG (2) 2 0.002 P4.5 retina TTGTACTCCC 2 0.002 P6.5 retina CCTTTCTAAG (2) 1.7 0.0017 P10.5 crx- retina AGTAACTGCA (3) 5.6 0.0056 P10.5 crx- retina TTGTACTCCC 1.9 0.0019 P10.5 crx+ retina AGTAACTGCA (3) 5.8 0.0058 P10.5 crx+ retina CCTTTCTAAG (2) 1.9 0.0019 Adult retinal AGTAACTGCA (3) 1.9 0.0019 ONL AGTAACTGCA (3) 1.9 0.0019