Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.13445	Oxct1	3-oxoacid CoA transferase 1	15		67041
Gene Ontology	3-oxoacid CoA-transferase activity | CoA-transferase activity | extracellular space | metabolism | mitochondrion | mitochondrion | succinyl-CoA metabolism | transferase activity
Human Homolog	OXCT1[3-oxoacid CoA transferase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATATTTTTTA 14.7 0.0147 P8 Cb GC CCAATGCAGC 9.8 0.0098 P8 Cb GC AATGCTAAAA 1.6 0.0016 P8 Cb GC AGTGCTAAGA 1.6 0.0016 P8 Cb GC ATATTTTTTT (2) 1.6 0.0016 P8 Cb GC GCACTCTTAG 1.6 0.0016 Cb medulloblastoma CCAATGCAGC 6.9 0.0069 Cb medulloblastoma ATATTTTTTA 4.6 0.0046 Cb medulloblastoma GCACTCTTAG 2.3 0.0023 P8 GC+1d culture ATATTTTTTA 10.3 0.0103 P8 GC+1d culture CCAATGCAGC 3.4 0.0034 P8 GC+1d culture AGTGCTAAGA 1.1 0.0011 P8 GC+1d culture GCACTCTTAG 1.1 0.0011 P8 GC+1d culture TTGTGAAGGG 1.1 0.0011 P8 GC+SHH+1d culture ATATTTTTTA 10.5 0.0105 P8 GC+SHH+1d culture CCAATGCAGC 2.3 0.0023 P8 GC+SHH+1d culture TGCAAGCTAA 2.3 0.0023 P8 GC+SHH+1d culture AGTCCTGAAT 1.2 0.0012 P8 GC+SHH+1d culture AGTGCTAAGA 1.2 0.0012 P8 GC+SHH+1d culture ATATTTTTTT (2) 1.2 0.0012 P8 GC+SHH+1d culture GCACTCTTAG 1.2 0.0012 3T3 fibroblasts CCAATGCAGC 17.5 0.0175 3T3 fibroblasts TGCATTTGTG 3.5 0.0035 E15 cortex CCAATGCAGC 4.9 0.0049 P1 cortex CCAATGCAGC 9.1 0.0091 P1 cortex ATATTTTTTA 4.5 0.0045 Hypothalamus ATATTTTTTA 5.4 0.0054 Hypothalamus AGTGCTAAGA 3.6 0.0036 Hypothalamus GCACTCTTAG 1.8 0.0018 Hypothalamus TTGTGAAGGG 1.8 0.0018 E12.5 retina AGTGCTAAGA 3.8 0.0038 E12.5 retina AATGCTAAAA 1.9 0.0019 E12.5 retina CCAATGCAGC 1.9 0.0019 E14.5 retina ATATTTTTTA 14.6 0.0146 E14.5 retina TGCATTTGTG 5.5 0.0055 E14.5 retina CCAATGCAGC 1.8 0.0018 E14.5 retina GCACTCTTAG 1.8 0.0018 E14.5 retina TTGTGAAGGG 1.8 0.0018 E16.5 retina ATATTTTTTA 10.9 0.0109 E16.5 retina AGTGCTAAGA 1.8 0.0018 E16.5 retina CCAATGCAGC 1.8 0.0018 E16.5 retina TGCATTTGTG 1.8 0.0018 E18.5 retina ATATTTTTTA 3.6 0.0036 E18.5 retina AATGCTAAAA 1.8 0.0018 E18.5 retina AGTGCTAAGA 1.8 0.0018 P0.5 retina CCAATGCAGC 2 0.002 P0.5 retina GCACTCTTAG 2 0.002 P2.5 retina AGTGCTAAGA 3.5 0.0035 P2.5 retina AATGCTAAAA 1.8 0.0018 P2.5 retina ATATTTTTTA 1.8 0.0018 P2.5 retina CCAATGCAGC 1.8 0.0018 P2.5 retina TGCATTTGTG 1.8 0.0018 P4.5 retina ATATTTTTTA 9.9 0.0099 P4.5 retina AGTCCTGAAT 2 0.002 P4.5 retina CCAATGCAGC 2 0.002 P4.5 retina TGCAAGCTAA 2 0.002 P6.5 retina ATATTTTTTA 6.7 0.0067 P6.5 retina CCAATGCAGC 6.7 0.0067 P6.5 retina AATGCTAAAA 1.7 0.0017 P6.5 retina AGTGCTAAGA 1.7 0.0017 P6.5 retina GCACTCTTAG 1.7 0.0017 P10.5 crx- retina ATATTTTTTA 3.7 0.0037 P10.5 crx- retina CCAATGCAGC 3.7 0.0037 P10.5 crx- retina AATGCTAAAA 1.9 0.0019 P10.5 crx+ retina CCAATGCAGC 1.9 0.0019 Adult retinal CCAATGCAGC 1.9 0.0019 ONL ATATTTTTTA 7.7 0.0077