Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.139176
C430014B12Rik
RIKEN cDNA C430014B12 gene
1
320829
Mm.139176
5230400G24Rik
RIKEN cDNA 5230400G24 gene
1
75734
Human Homolog
C2orf33[chromosome 2 open reading frame 33]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGAATGAT
(
4
)
9.8
0.0098
Cb medulloblastoma
TGTGAATGAT
(
4
)
23.1
0.0231
Cb medulloblastoma
CAAAAGGAGA
(
3
)
2.3
0.0023
Cb medulloblastoma
GACTTGGTAA
(
3
)
2.3
0.0023
P8 GC+1d culture
TGTGAATGAT
(
4
)
17.1
0.0171
P8 GC+1d culture
TATTCAATCA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TGTGAATGAT
(
4
)
16.4
0.0164
P8 GC+SHH+1d culture
CAGCAGCCCT
(
2
)
1.2
0.0012
E15 cortex
TGTGAATGAT
(
4
)
4.9
0.0049
P1 cortex
TGTGAATGAT
(
4
)
9.1
0.0091
Hypothalamus
TGTGAATGAT
(
4
)
21.7
0.0217
Hypothalamus
CAGCAGCCCT
(
2
)
1.8
0.0018
Hypothalamus
GACTTGGTAA
(
3
)
1.8
0.0018
Hypothalamus
TCTTGTAAAT
(
3
)
1.8
0.0018
E12.5 retina
TGTGAATGAT
(
4
)
11.3
0.0113
E12.5 retina
CAAAAGGAGA
(
3
)
1.9
0.0019
E12.5 retina
GACTTGGTAA
(
3
)
1.9
0.0019
E14.5 retina
TATTCAATCA
(
2
)
3.6
0.0036
E14.5 retina
TGTGAATGAT
(
4
)
3.6
0.0036
E16.5 retina
TGTGAATGAT
(
4
)
14.5
0.0145
E18.5 retina
TGTGAATGAT
(
4
)
14.6
0.0146
E18.5 retina
GACTTGGTAA
(
3
)
3.6
0.0036
E18.5 retina
TCTTGTAAAT
(
3
)
3.6
0.0036
E18.5 retina
TATTCAATCA
(
2
)
1.8
0.0018
P0.5 retina
TGTGAATGAT
(
4
)
15.7
0.0157
P0.5 retina
GACTTGGTAA
(
3
)
2
0.002
P2.5 retina
TGTGAATGAT
(
4
)
19.4
0.0194
P2.5 retina
TATTCAATCA
(
2
)
1.8
0.0018
P2.5 retina
TCTTGTAAAT
(
3
)
1.8
0.0018
P4.5 retina
TGTGAATGAT
(
4
)
27.7
0.0277
P4.5 retina
CAGCAGCCCT
(
2
)
2
0.002
P4.5 retina
GACTTGGTAA
(
3
)
2
0.002
P4.5 retina
TCTTGTAAAT
(
3
)
2
0.002
P6.5 retina
TGTGAATGAT
(
4
)
18.3
0.0183
P10.5 crx- retina
TGTGAATGAT
(
4
)
14.9
0.0149
P10.5 crx- retina
TATTCAATCA
(
2
)
5.6
0.0056
P10.5 crx- retina
CAAAAGGAGA
(
3
)
1.9
0.0019
P10.5 crx+ retina
TGTGAATGAT
(
4
)
21.1
0.0211
P10.5 crx+ retina
TCTTGTAAAT
(
3
)
1.9
0.0019
Adult retinal
TGTGAATGAT
(
4
)
5.6
0.0056
Adult retinal
GACTTGGTAA
(
3
)
1.9
0.0019
ONL
TGTGAATGAT
(
4
)
11.5
0.0115
