Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.142275	Cdk5r1	cyclin-dependent kinase 5, regulatory subunit (p35) 1	11	11 B5 (11 46.5 cM)	12569
Gene Ontology	cyclin-dependent protein kinase 5 activator activity | cyclin-dependent protein kinase 5 activator activity | cyclin-dependent protein kinase 5 activator complex | cytoskeletal protein binding | kinase activity | membrane fraction | protein binding
Human Homolog	CDK5R1[cyclin-dependent kinase 5, regulatory subunit 1 (p35)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGCTATGAA 21.2 0.0212 P8 Cb GC AAGCTCAGTT 14.7 0.0147 P8 Cb GC ACTCATCAGA 3.3 0.0033 P8 Cb GC TCAGATAGGT 3.3 0.0033 P8 Cb GC TGATGTTTTT 3.3 0.0033 P8 Cb GC GGGCAGTAGG 1.6 0.0016 Cb medulloblastoma AAGCTCAGTT 6.9 0.0069 Cb medulloblastoma CTGCTATGAA 4.6 0.0046 P8 GC+1d culture AAGCTCAGTT 11.4 0.0114 P8 GC+1d culture CTGCTATGAA 11.4 0.0114 P8 GC+1d culture ACTCATCAGA 4.6 0.0046 P8 GC+1d culture GGGCAGTAGG 3.4 0.0034 P8 GC+1d culture TGATGTTTTT 2.3 0.0023 P8 GC+1d culture TCAGATAGGT 1.1 0.0011 P8 GC+SHH+1d culture CTGCTATGAA 8.2 0.0082 P8 GC+SHH+1d culture AAGCTCAGTT 7 0.007 P8 GC+SHH+1d culture ACTCATCAGA 4.7 0.0047 P8 GC+SHH+1d culture TGATGTTTTT 1.2 0.0012 3T3 fibroblasts AAGCTCAGTT 3.5 0.0035 E15 cortex AAGCTCAGTT 64.3 0.0643 E15 cortex ACTCATCAGA 9.9 0.0099 E15 cortex CTGCTATGAA 4.9 0.0049 E15 cortex TGATGTTTTT 4.9 0.0049 P1 cortex ACTCATCAGA 27.3 0.0273 P1 cortex CTGCTATGAA 18.2 0.0182 P1 cortex AAGCTCAGTT 13.6 0.0136 P1 cortex TCAGATAGGT 9.1 0.0091 P1 cortex TGATGTTTTT 9.1 0.0091 Hypothalamus AAGCTCAGTT 18.1 0.0181 Hypothalamus CTGCTATGAA 7.2 0.0072 Hypothalamus TGATGTTTTT 5.4 0.0054 Hypothalamus ACTCATCAGA 1.8 0.0018 Hypothalamus TCAGATAGGT 1.8 0.0018 E12.5 retina ACTCATCAGA 1.9 0.0019 E12.5 retina CTGCTATGAA 1.9 0.0019 E14.5 retina CTGCTATGAA 20 0.02 E14.5 retina AAGCTCAGTT 16.4 0.0164 E14.5 retina ACTCATCAGA 3.6 0.0036 E16.5 retina CTGCTATGAA 19.9 0.0199 E16.5 retina AAGCTCAGTT 16.3 0.0163 E16.5 retina ACTCATCAGA 7.2 0.0072 E18.5 retina CTGCTATGAA 9.1 0.0091 E18.5 retina AAGCTCAGTT 7.3 0.0073 E18.5 retina ACTCATCAGA 3.6 0.0036 P0.5 retina AAGCTCAGTT 13.7 0.0137 P0.5 retina CTGCTATGAA 3.9 0.0039 P2.5 retina CTGCTATGAA 10.6 0.0106 P2.5 retina AAGCTCAGTT 3.5 0.0035 P4.5 retina CTGCTATGAA 15.9 0.0159 P4.5 retina AAGCTCAGTT 7.9 0.0079 P4.5 retina ACTCATCAGA 7.9 0.0079 P4.5 retina TCAGATAGGT 2 0.002 P4.5 retina TGATGTTTTT 2 0.002 P6.5 retina CTGCTATGAA 8.3 0.0083 P6.5 retina AAGCTCAGTT 5 0.005 P6.5 retina ACTCATCAGA 3.3 0.0033 P6.5 retina TCAGATAGGT 1.7 0.0017 P6.5 retina TGATGTTTTT 1.7 0.0017 P10.5 crx- retina AAGCTCAGTT 24.2 0.0242 P10.5 crx- retina CTGCTATGAA 9.3 0.0093 P10.5 crx- retina ACTCATCAGA 1.9 0.0019 P10.5 crx- retina GGGCAGTAGG 1.9 0.0019 P10.5 crx- retina TGATGTTTTT 1.9 0.0019 P10.5 crx+ retina CTGCTATGAA 5.8 0.0058 P10.5 crx+ retina GGGCAGTAGG 5.8 0.0058 P10.5 crx+ retina AAGCTCAGTT 3.8 0.0038 P10.5 crx+ retina TGATGTTTTT 1.9 0.0019 Adult retinal CTGCTATGAA 7.4 0.0074 Adult retinal AAGCTCAGTT 1.9 0.0019 Adult retinal TGATGTTTTT 1.9 0.0019 ONL CTGCTATGAA 3.8 0.0038