Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1451	Mfge8	milk fat globule-EGF factor 8 protein	7	7 41.2 cM	17304
Gene Ontology	cell adhesion | external side of plasma membrane | extracellular space | extracellular space | extrinsic to plasma membrane | fertilization (sensu Animalia) | integrin binding | phagocytosis, binding | phagocytosis, engulfment | phosphatidylethanolamine binding | phosphatidylserine binding | positive regulation of phagocytosis | protein binding
Human Homolog	AGC1[aggrecan 1 (chondroitin sulfate proteoglycan 1, large aggregating proteoglycan, antigen identified by monoclonal antibody A0122)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 GC+1d culture TTCCATTCCG 5.7 0.0057 P8 GC+1d culture GAGGAATGTG (3) 1.1 0.0011 P8 GC+SHH+1d culture TTCCATTCCG 2.3 0.0023 3T3 fibroblasts TTCCATTCCG 17.5 0.0175 E15 cortex TTCCATTCCG 4.9 0.0049 P1 cortex TTCCATTCCG 4.5 0.0045 Hypothalamus TTCCATTCCG 7.2 0.0072 Hypothalamus ACAGCCAGCA 1.8 0.0018 Hypothalamus TGGGGGCTGG 1.8 0.0018 E12.5 retina TTCCATTCCG 3.8 0.0038 E12.5 retina GAGGAATGTG (3) 1.9 0.0019 E12.5 retina TGGGGGCTGG 1.9 0.0019 E14.5 retina GCTGCCAGAC 1.8 0.0018 E16.5 retina TTCCATTCCG 5.4 0.0054 E16.5 retina GAGGAATGTG (3) 1.8 0.0018 E16.5 retina GCTGCCAGAC 1.8 0.0018 E18.5 retina TTCCATTCCG 1.8 0.0018 P0.5 retina TTCCATTCCG 9.8 0.0098 P0.5 retina GTCACAGTCA 2 0.002 P2.5 retina CCAAGCTTAT 3.5 0.0035 P2.5 retina GAGGAATGTG (3) 1.8 0.0018 P4.5 retina TGGGGGCTGG 2 0.002 P6.5 retina TTCCATTCCG 15 0.015 P6.5 retina GTCACAGTCA 3.3 0.0033 P6.5 retina ACAGCCAGCA 1.7 0.0017 P6.5 retina CCAAGCTTAT 1.7 0.0017 P10.5 crx- retina TTCCATTCCG 5.6 0.0056 P10.5 crx- retina GAGGAATGTG (3) 3.7 0.0037 P10.5 crx+ retina TTCCATTCCG 5.8 0.0058 P10.5 crx+ retina CCAAGCTTAT 1.9 0.0019 P10.5 crx+ retina GCTGCCAGAC 1.9 0.0019 Adult retinal TTCCATTCCG 22.2 0.0222 Adult retinal CCAAGCTTAT 3.7 0.0037 Adult retinal ACAGCCAGCA 1.9 0.0019 ONL CCAAGCTTAT 15.3 0.0153 ONL TTCCATTCCG 13.4 0.0134 ONL GAGGAATGTG (3) 1.9 0.0019 ONL GTCACAGTCA 1.9 0.0019