Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.14638	Gabarapl1	gamma-aminobutyric acid (GABA(A)) receptor-associated protein-like 1	6		57436
Gene Ontology	cytoskeletal protein binding
Human Homolog	GABARAPL1[GABA(A) receptor-associated protein like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACATTTCAAT (2) 3.3 0.0033 Cb medulloblastoma ACATTTCAAT (2) 4.6 0.0046 Cb medulloblastoma GAGGAGACGC (2) 2.3 0.0023 Cb medulloblastoma GGCCAGCTGT 2.3 0.0023 P8 GC+1d culture ACATTTCAAT (2) 11.4 0.0114 P8 GC+1d culture AAATTTCAAT 1.1 0.0011 P8 GC+1d culture GAGGAGACGC (2) 1.1 0.0011 P8 GC+SHH+1d culture ACATTTCAAT (2) 3.5 0.0035 P8 GC+SHH+1d culture GAAAAAGGGG 1.2 0.0012 P8 GC+SHH+1d culture GAAGGAGATA 1.2 0.0012 P8 GC+SHH+1d culture GAGGAGACGC (2) 1.2 0.0012 P8 GC+SHH+1d culture TACAGGGGCA 1.2 0.0012 P8 GC+SHH+1d culture TCGTCCCCAT 1.2 0.0012 3T3 fibroblasts GAGGAGACGC (2) 3.5 0.0035 E15 cortex GAGGAGACGC (2) 4.9 0.0049 P1 cortex ACATTTCAAT (2) 13.6 0.0136 Hypothalamus ACATTTCAAT (2) 19.9 0.0199 Hypothalamus TACAGGGGCA 7.2 0.0072 Hypothalamus GGCCAGCTGT 3.6 0.0036 Hypothalamus GAGGAGACGC (2) 1.8 0.0018 Hypothalamus TCGTCCCCAT 1.8 0.0018 Hypothalamus TGAGAATGCA (2) 1.8 0.0018 E12.5 retina ACATTTCAAT (2) 1.9 0.0019 E14.5 retina AAACTCTGGC (2) 3.6 0.0036 E14.5 retina ACATTTCAAT (2) 3.6 0.0036 E14.5 retina GAAGGAGATA 3.6 0.0036 E16.5 retina ACATTTCAAT (2) 5.4 0.0054 E16.5 retina TGAGAATGCA (2) 1.8 0.0018 E18.5 retina ACATTTCAAT (2) 9.1 0.0091 P0.5 retina ACATTTCAAT (2) 2 0.002 P0.5 retina GAGGAGACGC (2) 2 0.002 P2.5 retina ACATTTCAAT (2) 1.8 0.0018 P4.5 retina ACATTTCAAT (2) 9.9 0.0099 P4.5 retina GAAAAAGGGG 2 0.002 P6.5 retina ACATTTCAAT (2) 3.3 0.0033 P6.5 retina AAATTTCAAT 1.7 0.0017 P10.5 crx- retina ACATTTCAAT (2) 11.1 0.0111 P10.5 crx+ retina ACATTTCAAT (2) 13.5 0.0135 P10.5 crx+ retina GAGGAGACGC (2) 1.9 0.0019 Adult retinal ACATTTCAAT (2) 1.9 0.0019 ONL ACATTTCAAT (2) 21.1 0.0211 ONL AAATTTCAAT 3.8 0.0038 ONL AAACTCTGGC (2) 1.9 0.0019 ONL TCGTCCCCAT 1.9 0.0019 ONL TGAGAATGCA (2) 1.9 0.0019