Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.14644	Tsn	translin	1		22099
Gene Ontology	cytoplasm | cytoplasm | DNA binding | nucleus | protein binding | RNA binding
Human Homolog	TSN[translin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 102 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGATAATTA 11.4 0.0114 P8 Cb GC AGCATTGGCG 4.9 0.0049 P8 Cb GC TAAACTTTGG (2) 4.9 0.0049 P8 Cb GC GTTAGAGACT 1.6 0.0016 P8 Cb GC TATTCACTCC 1.6 0.0016 P8 Cb GC TCTGTGAGCG 1.6 0.0016 Cb medulloblastoma TAAACTTTGG (2) 4.6 0.0046 Cb medulloblastoma TTTACAAATA (2) 4.6 0.0046 Cb medulloblastoma AAGCCCAAAA 2.3 0.0023 P8 GC+1d culture TTGATAATTA 13.7 0.0137 P8 GC+1d culture AGCATTGGCG 5.7 0.0057 P8 GC+1d culture TTTACAAATA (2) 5.7 0.0057 P8 GC+1d culture GTTAGAGACT 3.4 0.0034 P8 GC+1d culture TAAACTTTGG (2) 3.4 0.0034 P8 GC+1d culture ACACTTCTAA 1.1 0.0011 P8 GC+SHH+1d culture TTGATAATTA 15.2 0.0152 P8 GC+SHH+1d culture TTTACAAATA (2) 9.4 0.0094 P8 GC+SHH+1d culture AAGCCCAAAA 5.9 0.0059 P8 GC+SHH+1d culture GTTAGAGACT 4.7 0.0047 P8 GC+SHH+1d culture AGCATTGGCG 3.5 0.0035 P8 GC+SHH+1d culture TAAACTTTGG (2) 2.3 0.0023 3T3 fibroblasts AGCATTGGCG 14 0.014 3T3 fibroblasts AAGCCCAAAA 3.5 0.0035 3T3 fibroblasts GTTAGAGACT 3.5 0.0035 E15 cortex AGCATTGGCG 19.8 0.0198 E15 cortex TAAACTTTGG (2) 9.9 0.0099 P1 cortex TTGATAATTA 18.2 0.0182 P1 cortex GTTAGAGACT 4.5 0.0045 P1 cortex TAAACTTTGG (2) 4.5 0.0045 P1 cortex TATTCACTCC 4.5 0.0045 P1 cortex TTTACAAATA (2) 4.5 0.0045 Hypothalamus TTTACAAATA (2) 5.4 0.0054 Hypothalamus AGCATTGGCG 3.6 0.0036 Hypothalamus TTGATAATTA 3.6 0.0036 Hypothalamus AAGCCCAAAA 1.8 0.0018 Hypothalamus TATTCACTCC 1.8 0.0018 E12.5 retina AAGCCCAAAA 11.3 0.0113 E12.5 retina TTGATAATTA 11.3 0.0113 E12.5 retina TTTACAAATA (2) 5.6 0.0056 E12.5 retina TAAACTTTGG (2) 3.8 0.0038 E12.5 retina GTTAGAGACT 1.9 0.0019 E14.5 retina TTGATAATTA 7.3 0.0073 E14.5 retina ACACTTCTAA 3.6 0.0036 E14.5 retina AAGCCCAAAA 1.8 0.0018 E14.5 retina TAAACTTTGG (2) 1.8 0.0018 E14.5 retina TTTACAAATA (2) 1.8 0.0018 E16.5 retina TTGATAATTA 14.5 0.0145 E16.5 retina TAAACTTTGG (2) 7.2 0.0072 E16.5 retina AAGCCCAAAA 3.6 0.0036 E16.5 retina AGCATTGGCG 3.6 0.0036 E16.5 retina GTTAGAGACT 3.6 0.0036 E16.5 retina TCTGTGAGCG 3.6 0.0036 E16.5 retina ACACTTCTAA 1.8 0.0018 E16.5 retina TTTACAAATA (2) 1.8 0.0018 E18.5 retina TTGATAATTA 10.9 0.0109 E18.5 retina GTTAGAGACT 5.5 0.0055 E18.5 retina TTTACAAATA (2) 3.6 0.0036 E18.5 retina TAAACTTTGG (2) 1.8 0.0018 P0.5 retina TTGATAATTA 9.8 0.0098 P0.5 retina TAAACTTTGG (2) 3.9 0.0039 P0.5 retina AAGCCCAAAA 2 0.002 P0.5 retina GTTAGAGACT 2 0.002 P0.5 retina TTTACAAATA (2) 2 0.002 P2.5 retina TTGATAATTA 14.1 0.0141 P2.5 retina TTTACAAATA (2) 12.3 0.0123 P2.5 retina AGCATTGGCG 8.8 0.0088 P2.5 retina TAAACTTTGG (2) 7 0.007 P2.5 retina ACACTTCTAA 3.5 0.0035 P2.5 retina GTTAGAGACT 3.5 0.0035 P2.5 retina GTAGTTTCAC 1.8 0.0018 P2.5 retina TATTCACTCC 1.8 0.0018 P4.5 retina TTTACAAATA (2) 15.9 0.0159 P4.5 retina TTGATAATTA 13.9 0.0139 P4.5 retina AAGCCCAAAA 4 0.004 P4.5 retina TAAACTTTGG (2) 4 0.004 P4.5 retina AGCATTGGCG 2 0.002 P4.5 retina GTAGTTTCAC 2 0.002 P4.5 retina GTTAGAGACT 2 0.002 P6.5 retina TTGATAATTA 8.3 0.0083 P6.5 retina AGCATTGGCG 5 0.005 P6.5 retina GTTAGAGACT 3.3 0.0033 P6.5 retina TAAACTTTGG (2) 1.7 0.0017 P6.5 retina TTTACAAATA (2) 1.7 0.0017 P10.5 crx- retina TTGATAATTA 16.7 0.0167 P10.5 crx- retina TTTACAAATA (2) 3.7 0.0037 P10.5 crx- retina GTAGTTTCAC 1.9 0.0019 P10.5 crx- retina TAAACTTTGG (2) 1.9 0.0019 P10.5 crx+ retina TTGATAATTA 7.7 0.0077 P10.5 crx+ retina TTTACAAATA (2) 3.8 0.0038 P10.5 crx+ retina AAGCCCAAAA 1.9 0.0019 P10.5 crx+ retina AGCATTGGCG 1.9 0.0019 P10.5 crx+ retina GTTAGAGACT 1.9 0.0019 Adult retinal GTTAGAGACT 3.7 0.0037 Adult retinal AAGCCCAAAA 1.9 0.0019 Adult retinal ACACTTCTAA 1.9 0.0019 Adult retinal AGCATTGGCG 1.9 0.0019 Adult retinal TAAACTTTGG (2) 1.9 0.0019 Adult retinal TTGATAATTA 1.9 0.0019 Adult retinal TTTACAAATA (2) 1.9 0.0019 ONL TTGATAATTA 5.7 0.0057 ONL AAGCCCAAAA 1.9 0.0019 ONL TTTACAAATA (2) 1.9 0.0019