Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.149309	B430202H16Rik	RIKEN cDNA B430202H16 gene	8		319324
Mm.149309	Rent1	regulator of nonsense transcripts 1	8	8 33.5 cM	19704
Gene Ontology	ATP binding | DNA restriction | helicase activity | hydrolase activity | type III site-specific deoxyribonuclease activity
Human Homolog	RENT1[regulator of nonsense transcripts 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGGGTGATG (4) 6.5 0.0065 P8 Cb GC AACAAACAAA (3) 1.6 0.0016 P8 Cb GC AACAAACAGA (2) 1.6 0.0016 Cb medulloblastoma TTTTATTGGT (2) 9.2 0.0092 Cb medulloblastoma AACAAACAAA (3) 2.3 0.0023 Cb medulloblastoma AGCCAGCCCT (2) 2.3 0.0023 Cb medulloblastoma CAGGGTGATG (4) 2.3 0.0023 P8 GC+1d culture CAGGGTGATG (4) 11.4 0.0114 P8 GC+1d culture AACAAACAAA (3) 8 0.008 P8 GC+1d culture TTTTATTGGT (2) 3.4 0.0034 P8 GC+1d culture AGCCAGCCCT (2) 1.1 0.0011 P8 GC+SHH+1d culture CAGGGTGATG (4) 9.4 0.0094 P8 GC+SHH+1d culture TTTTATTGGT (2) 8.2 0.0082 P8 GC+SHH+1d culture AACAAACAAA (3) 5.9 0.0059 P8 GC+SHH+1d culture AACAAACAGT (2) 1.2 0.0012 3T3 fibroblasts AGCCAGCCCT (2) 7 0.007 P1 cortex AACAAACAAA (3) 4.5 0.0045 P1 cortex CAGGGTGATG (4) 4.5 0.0045 P1 cortex TTTTATTGGT (2) 4.5 0.0045 Hypothalamus CAGGGTGATG (4) 16.3 0.0163 Hypothalamus TTTTATTGGT (2) 5.4 0.0054 Hypothalamus AACAAACAAA (3) 3.6 0.0036 Hypothalamus AGCCAGCCCT (2) 1.8 0.0018 E12.5 retina CAGGGTGATG (4) 9.4 0.0094 E12.5 retina AACAAACAAA (3) 1.9 0.0019 E12.5 retina AACAAACAGT (2) 1.9 0.0019 E12.5 retina TTTTATTGGT (2) 1.9 0.0019 E14.5 retina CAGGGTGATG (4) 5.5 0.0055 E14.5 retina TTTTATTGGT (2) 3.6 0.0036 E16.5 retina AACAAACAAA (3) 5.4 0.0054 E16.5 retina CAGGGTGATG (4) 3.6 0.0036 E16.5 retina TTTTATTGGT (2) 3.6 0.0036 E18.5 retina AACAAACAAA (3) 3.6 0.0036 E18.5 retina TTTTATTGGT (2) 3.6 0.0036 E18.5 retina CAGGGTGATG (4) 1.8 0.0018 P0.5 retina CAGGGTGATG (4) 9.8 0.0098 P0.5 retina AACAAACAAA (3) 3.9 0.0039 P0.5 retina AGCCAGCCCT (2) 2 0.002 P0.5 retina TTTTATTGGT (2) 2 0.002 P2.5 retina CAGGGTGATG (4) 21.1 0.0211 P2.5 retina AACAAACAAA (3) 10.6 0.0106 P2.5 retina TTTTATTGGT (2) 1.8 0.0018 P4.5 retina AACAAACAAA (3) 9.9 0.0099 P4.5 retina TTTTATTGGT (2) 5.9 0.0059 P4.5 retina CAGGGTGATG (4) 4 0.004 P4.5 retina AACAAACAGA (2) 2 0.002 P4.5 retina AACAAACAGT (2) 2 0.002 P6.5 retina AACAAACAAA (3) 10 0.01 P6.5 retina CAGGGTGATG (4) 6.7 0.0067 P6.5 retina TTTTATTGGT (2) 1.7 0.0017 P10.5 crx- retina TTTTATTGGT (2) 7.4 0.0074 P10.5 crx- retina AACAAACAAA (3) 3.7 0.0037 P10.5 crx- retina AACAAACAGT (2) 1.9 0.0019 P10.5 crx+ retina TTTTATTGGT (2) 3.8 0.0038 P10.5 crx+ retina AACAAACAAA (3) 1.9 0.0019 P10.5 crx+ retina AACAAACAGA (2) 1.9 0.0019 Adult retinal CAGGGTGATG (4) 13 0.013 Adult retinal AGCCAGCCCT (2) 3.7 0.0037 Adult retinal TTTTATTGGT (2) 1.9 0.0019 ONL AACAAACAAA (3) 3.8 0.0038 ONL CAGGGTGATG (4) 3.8 0.0038