Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.154378	C130036L24Rik	RIKEN cDNA C130036L24 gene	1		319336
Mm.154378	Ncl	nucleolin	1	1 48.4 cM	17975
Gene Ontology	DNA binding | nucleolus | nucleus | RNA binding
Human Homolog	NCL[nucleolin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 89 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGAGGAAGA (4) 3.3 0.0033 P8 Cb GC GAAGATGGAG (4) 3.3 0.0033 P8 Cb GC GCAAACCTAA (3) 3.3 0.0033 P8 Cb GC GCCTCTTGGG (3) 3.3 0.0033 P8 Cb GC GTGAAGCTCG (2) 3.3 0.0033 P8 Cb GC CCTTTAACCC (2) 1.6 0.0016 P8 Cb GC GATCAGTGCT (2) 1.6 0.0016 P8 Cb GC GGAGGCTAAA (2) 1.6 0.0016 Cb medulloblastoma GCAAACCTAA (3) 4.6 0.0046 Cb medulloblastoma GTGAAGCTCG (2) 4.6 0.0046 Cb medulloblastoma GAGATCAGAT (2) 2.3 0.0023 P8 GC+1d culture GAAGATGGAG (4) 10.3 0.0103 P8 GC+1d culture GCCTCTTGGG (3) 5.7 0.0057 P8 GC+1d culture GCAAACCTAA (3) 1.1 0.0011 P8 GC+1d culture GCCTCCTTGG (3) 1.1 0.0011 P8 GC+SHH+1d culture GAAGATGGAG (4) 9.4 0.0094 P8 GC+SHH+1d culture GCCTCTTGGG (3) 5.9 0.0059 P8 GC+SHH+1d culture GGAGGCTAAA (2) 4.7 0.0047 P8 GC+SHH+1d culture GGCGGCGATG (2) 2.3 0.0023 P8 GC+SHH+1d culture CCTTTAACCC (2) 1.2 0.0012 P8 GC+SHH+1d culture GAGATCAGAT (2) 1.2 0.0012 P8 GC+SHH+1d culture GCAAACCTAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGAAGCTCG (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGGCGGATT (2) 1.2 0.0012 3T3 fibroblasts GAAGATGGAG (4) 21 0.021 3T3 fibroblasts GCCTCTTGGG (3) 7 0.007 3T3 fibroblasts GTGAAGCTCG (2) 7 0.007 3T3 fibroblasts CCTTTAACCC (2) 3.5 0.0035 3T3 fibroblasts GTGGCGGATT (2) 3.5 0.0035 E15 cortex GAAGATGGAG (4) 9.9 0.0099 E15 cortex CCTTTAACCC (2) 4.9 0.0049 E15 cortex GTGAAGCTCG (2) 4.9 0.0049 P1 cortex CCTTTAACCC (2) 4.5 0.0045 P1 cortex GAAGATGGAG (4) 4.5 0.0045 P1 cortex GCCTCCTTGG (3) 4.5 0.0045 Hypothalamus GAAGATGGAG (4) 3.6 0.0036 Hypothalamus GCCTCTTGGG (3) 3.6 0.0036 Hypothalamus ATGAGGAAGA (4) 1.8 0.0018 E12.5 retina GAAGATGGAG (4) 15 0.015 E12.5 retina GCCTCTTGGG (3) 9.4 0.0094 E12.5 retina GGAGGCTAAA (2) 3.8 0.0038 E14.5 retina CCTTTAACCC (2) 1.8 0.0018 E14.5 retina GAAGATGGAG (4) 1.8 0.0018 E14.5 retina GAGATCAGAT (2) 1.8 0.0018 E14.5 retina GCAAACCTAA (3) 1.8 0.0018 E14.5 retina GGCGGCGATG (2) 1.8 0.0018 E16.5 retina GATCAGTGCT (2) 3.6 0.0036 E16.5 retina GAAGATGGAG (4) 1.8 0.0018 E16.5 retina GAGATCAGAT (2) 1.8 0.0018 E18.5 retina GAAGATGGAG (4) 5.5 0.0055 E18.5 retina GCCTCTTGGG (3) 3.6 0.0036 E18.5 retina GTGGCGGATT (2) 1.8 0.0018 P0.5 retina GAAGATGGAG (4) 17.7 0.0177 P0.5 retina GCCTCTTGGG (3) 2 0.002 P0.5 retina GGAGGCTAAA (2) 2 0.002 P0.5 retina GGCGGCGATG (2) 2 0.002 P0.5 retina GTGAAGCTCG (2) 2 0.002 P2.5 retina GAAGATGGAG (4) 14.1 0.0141 P2.5 retina GCCTCTTGGG (3) 10.6 0.0106 P2.5 retina GTGGCGGATT (2) 3.5 0.0035 P2.5 retina GCCTCCTTGG (3) 1.8 0.0018 P2.5 retina GTGAAGCTCG (2) 1.8 0.0018 P4.5 retina CCTTTAACCC (2) 7.9 0.0079 P4.5 retina GAAGATGGAG (4) 4 0.004 P4.5 retina GCCTCTTGGG (3) 4 0.004 P4.5 retina GGAGGCTAAA (2) 2 0.002 P6.5 retina CCTTTAACCC (2) 3.3 0.0033 P6.5 retina GAAGATGGAG (4) 3.3 0.0033 P6.5 retina GCCTCCTTGG (3) 1.7 0.0017 P6.5 retina GCCTCTTGGG (3) 1.7 0.0017 P10.5 crx- retina GCCTCTTGGG (3) 1.9 0.0019 P10.5 crx- retina GGCGGCGATG (2) 1.9 0.0019 P10.5 crx- retina GTGAAGCTCG (2) 1.9 0.0019 P10.5 crx+ retina GAAGATGGAG (4) 3.8 0.0038 P10.5 crx+ retina GCAAACCTAA (3) 1.9 0.0019 P10.5 crx+ retina GCCTCCTTGG (3) 1.9 0.0019 P10.5 crx+ retina GCCTCTTGGG (3) 1.9 0.0019 P10.5 crx+ retina GTGAAGCTCG (2) 1.9 0.0019 Adult retinal GCCTCTTGGG (3) 5.6 0.0056 Adult retinal GAAGATGGAG (4) 3.7 0.0037 Adult retinal GGCGGCGATG (2) 3.7 0.0037 Adult retinal GTGAAGCTCG (2) 3.7 0.0037 Adult retinal CCTTTAACCC (2) 1.9 0.0019 Adult retinal GCAAACCTAA (3) 1.9 0.0019 ONL CCTTTAACCC (2) 17.2 0.0172 ONL GAAGATGGAG (4) 5.7 0.0057 ONL GCCTCCTTGG (3) 1.9 0.0019 ONL GCCTCTTGGG (3) 1.9 0.0019 ONL GGCGGCGATG (2) 1.9 0.0019