Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.155896	Hnrpa2b1	heterogeneous nuclear ribonucleoprotein A2/B1	6	6 B3	53379
Gene Ontology	nucleus | ribonucleoprotein complex | RNA binding | RNA processing | viral nucleocapsid
Human Homolog	HNRPA2B1[heterogeneous nuclear ribonucleoprotein A2/B1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 174 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGTAATAAG 122.4 0.1224 P8 Cb GC CATAAATATG 4.9 0.0049 P8 Cb GC GACAAGTATA (2) 3.3 0.0033 P8 Cb GC GCTGCAAGGC 1.6 0.0016 P8 Cb GC GGAAGGTGTC 1.6 0.0016 P8 Cb GC GGAATAAAGA (4) 1.6 0.0016 P8 Cb GC GTAAGTAGGA 1.6 0.0016 P8 Cb GC TGAAACCTTT (2) 1.6 0.0016 P8 Cb GC TGACTGTGAA 1.6 0.0016 Cb medulloblastoma GTGTAATAAG 23.1 0.0231 Cb medulloblastoma GGAATAAAGA (4) 4.6 0.0046 Cb medulloblastoma ATCCTGTGGA (2) 2.3 0.0023 Cb medulloblastoma GTGTGATAAG 2.3 0.0023 Cb medulloblastoma TGACTGTGAA 2.3 0.0023 P8 GC+1d culture GTGTAATAAG 109.6 0.1096 P8 GC+1d culture TTCCTGCTAC (3) 4.6 0.0046 P8 GC+1d culture GACAAGTATA (2) 3.4 0.0034 P8 GC+1d culture GGAAGGTGTC 3.4 0.0034 P8 GC+1d culture GGAATAAAGA (4) 3.4 0.0034 P8 GC+1d culture GTAAGTAGGA 2.3 0.0023 P8 GC+1d culture ACTGAGATAA 1.1 0.0011 P8 GC+1d culture ATCCTGTGGA (2) 1.1 0.0011 P8 GC+1d culture CATAAATATG 1.1 0.0011 P8 GC+1d culture GGAGGACCAT 1.1 0.0011 P8 GC+SHH+1d culture GTGTAATAAG 144 0.144 P8 GC+SHH+1d culture GGAATAAAGA (4) 8.2 0.0082 P8 GC+SHH+1d culture TTCCTGCTAC (3) 8.2 0.0082 P8 GC+SHH+1d culture CATAAATATG 3.5 0.0035 P8 GC+SHH+1d culture GACAAGTATA (2) 3.5 0.0035 P8 GC+SHH+1d culture ACTGAGATAA 2.3 0.0023 P8 GC+SHH+1d culture GTAAGTAGGA 2.3 0.0023 P8 GC+SHH+1d culture ATCCTGTGGA (2) 1.2 0.0012 P8 GC+SHH+1d culture GGAGGACCAT 1.2 0.0012 P8 GC+SHH+1d culture TGACTGTGAA 1.2 0.0012 3T3 fibroblasts GGAAGGTGTC 7 0.007 3T3 fibroblasts GCTGCAAGGC 3.5 0.0035 3T3 fibroblasts GTAAGTAGGA 3.5 0.0035 3T3 fibroblasts GTGTAATAAG 3.5 0.0035 E15 cortex GGAATAAAGA (4) 14.8 0.0148 E15 cortex GTGTAATAAG 9.9 0.0099 E15 cortex ATAAACTTCT (2) 4.9 0.0049 E15 cortex ATCCTGTGGA (2) 4.9 0.0049 E15 cortex CATAAATATG 4.9 0.0049 P1 cortex GTGTAATAAG 31.8 0.0318 P1 cortex GGAGGTGTCT 9.1 0.0091 P1 cortex TGACTGTGAA 9.1 0.0091 P1 cortex ATCCTGTGGA (2) 4.5 0.0045 P1 cortex CATAAATATG 4.5 0.0045 P1 cortex GACAAGTATA (2) 4.5 0.0045 P1 cortex GGAATAAAGA (4) 4.5 0.0045 Hypothalamus GTGTAATAAG 14.5 0.0145 Hypothalamus GGAATAAAGA (4) 9.1 0.0091 Hypothalamus TTCCTGCTAC (3) 5.4 0.0054 Hypothalamus ATCCTGTGGA (2) 3.6 0.0036 Hypothalamus ATAAACTTCT (2) 1.8 0.0018 Hypothalamus CATAAAATAT (2) 1.8 0.0018 Hypothalamus TTATCTTTCC (2) 1.8 0.0018 E12.5 retina GTGTAATAAG 120.1 0.1201 E12.5 retina ACTGAGATAA 9.4 0.0094 E12.5 retina GACAAGTATA (2) 7.5 0.0075 E12.5 retina TTATCTTTCC (2) 5.6 0.0056 E12.5 retina ATAAACTTCT (2) 1.9 0.0019 E12.5 retina ATCCTGTGGA (2) 1.9 0.0019 E12.5 retina GGAAGGTGTC 1.9 0.0019 E12.5 retina GTAAGTAGGA 1.9 0.0019 E12.5 retina GTTCATATCA 1.9 0.0019 E12.5 retina TGAAACCTTT (2) 1.9 0.0019 E12.5 retina TTCCTGCTAC (3) 1.9 0.0019 E12.5 retina TTTGTCCACA 1.9 0.0019 E14.5 retina GTGTAATAAG 92.9 0.0929 E14.5 retina TTCCTGCTAC (3) 12.8 0.0128 E14.5 retina GTAAGTAGGA 7.3 0.0073 E14.5 retina GGAATAAAGA (4) 5.5 0.0055 E14.5 retina ACTGAGATAA 3.6 0.0036 E14.5 retina GGAGGACCAT 3.6 0.0036 E14.5 retina ATCCTGTGGA (2) 1.8 0.0018 E14.5 retina CATAAATATG 1.8 0.0018 E14.5 retina GACAAGTATA (2) 1.8 0.0018 E14.5 retina GCTGCAAGGC 1.8 0.0018 E14.5 retina GGGTAATAAG 1.8 0.0018 E14.5 retina TGAAACCTTT (2) 1.8 0.0018 E14.5 retina TGACTGTGAA 1.8 0.0018 E16.5 retina GTGTAATAAG 94.2 0.0942 E16.5 retina CATAAATATG 5.4 0.0054 E16.5 retina GTAAGTAGGA 5.4 0.0054 E16.5 retina TGAAACCTTT (2) 5.4 0.0054 E16.5 retina TTCCTGCTAC (3) 5.4 0.0054 E16.5 retina ATAAACTTCT (2) 3.6 0.0036 E16.5 retina ACTGAGATAA 1.8 0.0018 E16.5 retina ATCCTGTGGA (2) 1.8 0.0018 E16.5 retina GACAAGTATA (2) 1.8 0.0018 E16.5 retina GGAATAAAGA (4) 1.8 0.0018 E16.5 retina GGAGGACCAT 1.8 0.0018 E16.5 retina GGGTAATAAG 1.8 0.0018 E16.5 retina TTTGTCCACA 1.8 0.0018 E18.5 retina GTGTAATAAG 96.4 0.0964 E18.5 retina CATAAATATG 5.5 0.0055 E18.5 retina ACTGAGATAA 3.6 0.0036 E18.5 retina GTAAGTAGGA 3.6 0.0036 E18.5 retina TTATCTTTCC (2) 3.6 0.0036 E18.5 retina GACAAGTATA (2) 1.8 0.0018 E18.5 retina GGAGGTGTCT 1.8 0.0018 E18.5 retina GGGTAATAAG 1.8 0.0018 E18.5 retina GTTCATATCA 1.8 0.0018 E18.5 retina TGACTGTGAA 1.8 0.0018 P0.5 retina GTGTAATAAG 56.9 0.0569 P0.5 retina GACAAGTATA (2) 19.6 0.0196 P0.5 retina ACTGAGATAA 5.9 0.0059 P0.5 retina ATAAACTTCT (2) 5.9 0.0059 P0.5 retina GGAGGTGTCT 5.9 0.0059 P0.5 retina CATAAAATAT (2) 2 0.002 P0.5 retina GTAAGTAGGA 2 0.002 P0.5 retina GTGTGATAAG 2 0.002 P0.5 retina TGAAACCTTT (2) 2 0.002 P0.5 retina TTCCTGCTAC (3) 2 0.002 P2.5 retina GTGTAATAAG 86.2 0.0862 P2.5 retina GACAAGTATA (2) 5.3 0.0053 P2.5 retina GGAATAAAGA (4) 5.3 0.0053 P2.5 retina CATAAAATAT (2) 3.5 0.0035 P2.5 retina GTGTAATAAA 3.5 0.0035 P2.5 retina ATAAACTTCT (2) 1.8 0.0018 P2.5 retina GTAAGTAGGA 1.8 0.0018 P2.5 retina GTGTGATAAG 1.8 0.0018 P2.5 retina GTTCATATCA 1.8 0.0018 P2.5 retina TTATCTTTCC (2) 1.8 0.0018 P2.5 retina TTCCTGCTAC (3) 1.8 0.0018 P2.5 retina TTTGTCCACA 1.8 0.0018 P4.5 retina GTGTAATAAG 109 0.109 P4.5 retina GACAAGTATA (2) 4 0.004 P4.5 retina GGAATAAAGA (4) 4 0.004 P4.5 retina ACTGAGATAA 2 0.002 P4.5 retina ATAAACTTCT (2) 2 0.002 P4.5 retina GTGTAATAAA 2 0.002 P4.5 retina GTGTGATAAG 2 0.002 P4.5 retina TGACTGTGAA 2 0.002 P4.5 retina TTCCTGCTAC (3) 2 0.002 P6.5 retina GTGTAATAAG 50 0.05 P6.5 retina GACAAGTATA (2) 8.3 0.0083 P6.5 retina ACTGAGATAA 6.7 0.0067 P6.5 retina CATAAATATG 5 0.005 P6.5 retina GGAATAAAGA (4) 5 0.005 P6.5 retina TTCCTGCTAC (3) 3.3 0.0033 P6.5 retina ATCCTGTGGA (2) 1.7 0.0017 P6.5 retina GGGTAATAAG 1.7 0.0017 P6.5 retina TTATCTTTCC (2) 1.7 0.0017 P10.5 crx- retina GTGTAATAAG 37.2 0.0372 P10.5 crx- retina ATAAACTTCT (2) 5.6 0.0056 P10.5 crx- retina GACAAGTATA (2) 5.6 0.0056 P10.5 crx- retina CATAAATATG 3.7 0.0037 P10.5 crx- retina GGAATAAAGA (4) 3.7 0.0037 P10.5 crx- retina CATAAAATAT (2) 1.9 0.0019 P10.5 crx- retina GGAAGGTGTC 1.9 0.0019 P10.5 crx- retina GGGTAATAAG 1.9 0.0019 P10.5 crx- retina TGAAACCTTT (2) 1.9 0.0019 P10.5 crx- retina TTATCTTTCC (2) 1.9 0.0019 P10.5 crx- retina TTCCTGCTAC (3) 1.9 0.0019 P10.5 crx+ retina GTGTAATAAG 44.2 0.0442 P10.5 crx+ retina ACTGAGATAA 3.8 0.0038 P10.5 crx+ retina ATAAACTTCT (2) 3.8 0.0038 P10.5 crx+ retina GGAATAAAGA (4) 3.8 0.0038 P10.5 crx+ retina TTTGTCCACA 3.8 0.0038 P10.5 crx+ retina GACAAGTATA (2) 1.9 0.0019 P10.5 crx+ retina GTAAGTAGGA 1.9 0.0019 P10.5 crx+ retina TTCCTGCTAC (3) 1.9 0.0019 Adult retinal GTGTAATAAG 18.5 0.0185 Adult retinal CATAAATATG 3.7 0.0037 Adult retinal GACAAGTATA (2) 3.7 0.0037 Adult retinal ATAAACTTCT (2) 1.9 0.0019 Adult retinal GGAATAAAGA (4) 1.9 0.0019 ONL GTGTAATAAG 36.4 0.0364 ONL GACAAGTATA (2) 9.6 0.0096 ONL GGAATAAAGA (4) 5.7 0.0057 ONL CATAAAATAT (2) 1.9 0.0019 ONL TTTGTCCACA 1.9 0.0019