Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.158231
Sdha
succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
13
66945
Mm.158231
1500032O14Rik
RIKEN cDNA 1500032O14 gene
13
69027
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 72 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAGTAGTGGA
(
2
)
19.6
0.0196
P8 Cb GC
ATAACACTAT
(
2
)
4.9
0.0049
P8 Cb GC
CCCTGACTTC
(
3
)
3.3
0.0033
Cb medulloblastoma
TAGTAGTGGA
(
2
)
25.4
0.0254
Cb medulloblastoma
CCCTGACTTC
(
3
)
16.2
0.0162
Cb medulloblastoma
CCAGGGAAGA
(
2
)
2.3
0.0023
Cb medulloblastoma
TAGTAGTGAA
(
2
)
2.3
0.0023
P8 GC+1d culture
TAGTAGTGGA
(
2
)
9.1
0.0091
P8 GC+1d culture
CCCTGACTTC
(
3
)
3.4
0.0034
P8 GC+SHH+1d culture
TAGTAGTGGA
(
2
)
11.7
0.0117
P8 GC+SHH+1d culture
CCCTGACTTC
(
3
)
4.7
0.0047
P8 GC+SHH+1d culture
CCAGGGAAGA
(
2
)
2.3
0.0023
3T3 fibroblasts
CCCTGACTTC
(
3
)
3.5
0.0035
3T3 fibroblasts
GCGACGGGCA
(
3
)
3.5
0.0035
E15 cortex
CCCTGACTTC
(
3
)
4.9
0.0049
E15 cortex
GCGACGGGCA
(
3
)
4.9
0.0049
E15 cortex
GGGCGGGGGG
(
2
)
4.9
0.0049
P1 cortex
CCCTGACTTC
(
3
)
18.2
0.0182
P1 cortex
AATTTGATGC
(
3
)
4.5
0.0045
Hypothalamus
TAGTAGTGGA
(
2
)
27.2
0.0272
Hypothalamus
CCCTGACTTC
(
3
)
9.1
0.0091
Hypothalamus
TAGTAGTGAA
(
2
)
3.6
0.0036
Hypothalamus
GGCTCCCGGG
(
2
)
1.8
0.0018
E12.5 retina
TAGTAGTGGA
(
2
)
15
0.015
E12.5 retina
CCAGGGAAGA
(
2
)
3.8
0.0038
E12.5 retina
CCCTGACTTC
(
3
)
1.9
0.0019
E12.5 retina
GGGCGGGGGG
(
2
)
1.9
0.0019
E12.5 retina
TAGTAGTGAA
(
2
)
1.9
0.0019
E14.5 retina
TAGTAGTGGA
(
2
)
20
0.02
E14.5 retina
CCCTGACTTC
(
3
)
7.3
0.0073
E14.5 retina
AACAAGGAGT
(
3
)
1.8
0.0018
E14.5 retina
GCGACGGGCA
(
3
)
1.8
0.0018
E14.5 retina
TAGTAGTGAA
(
2
)
1.8
0.0018
E16.5 retina
TAGTAGTGGA
(
2
)
19.9
0.0199
E16.5 retina
CCAGGGAAGA
(
2
)
1.8
0.0018
E16.5 retina
CCCTGACTTC
(
3
)
1.8
0.0018
E16.5 retina
GGCTCCCGGG
(
2
)
1.8
0.0018
E18.5 retina
TAGTAGTGGA
(
2
)
34.6
0.0346
E18.5 retina
ATAACACTAT
(
2
)
1.8
0.0018
E18.5 retina
CCCTGACTTC
(
3
)
1.8
0.0018
E18.5 retina
GGCTCCCGGG
(
2
)
1.8
0.0018
P0.5 retina
TAGTAGTGGA
(
2
)
11.8
0.0118
P0.5 retina
CCCTGACTTC
(
3
)
9.8
0.0098
P0.5 retina
ATAACACTAT
(
2
)
2
0.002
P0.5 retina
GGCTCCCGGG
(
2
)
2
0.002
P0.5 retina
TAGTAGTGAA
(
2
)
2
0.002
P2.5 retina
TAGTAGTGGA
(
2
)
15.8
0.0158
P2.5 retina
CCCTGACTTC
(
3
)
8.8
0.0088
P2.5 retina
TAGTAGTGAA
(
2
)
8.8
0.0088
P2.5 retina
GGGCGGGGGG
(
2
)
3.5
0.0035
P4.5 retina
TAGTAGTGGA
(
2
)
19.8
0.0198
P4.5 retina
CCCTGACTTC
(
3
)
4
0.004
P4.5 retina
TAGTAGTGAA
(
2
)
2
0.002
P6.5 retina
TAGTAGTGGA
(
2
)
18.3
0.0183
P6.5 retina
CCCTGACTTC
(
3
)
5
0.005
P6.5 retina
AACAAGGAGT
(
3
)
1.7
0.0017
P6.5 retina
TAGTAGTGAA
(
2
)
1.7
0.0017
P10.5 crx- retina
TAGTAGTGGA
(
2
)
20.4
0.0204
P10.5 crx- retina
AACAAGGAGT
(
3
)
13
0.013
P10.5 crx- retina
CCCTGACTTC
(
3
)
1.9
0.0019
P10.5 crx- retina
GCGACGGGCA
(
3
)
1.9
0.0019
P10.5 crx- retina
TAGTAGTGAA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TAGTAGTGGA
(
2
)
21.1
0.0211
P10.5 crx+ retina
CCCTGACTTC
(
3
)
5.8
0.0058
P10.5 crx+ retina
TAGTAGTGAA
(
2
)
1.9
0.0019
Adult retinal
TAGTAGTGGA
(
2
)
11.1
0.0111
Adult retinal
CCCTGACTTC
(
3
)
9.3
0.0093
Adult retinal
GGCTCCCGGG
(
2
)
1.9
0.0019
ONL
TAGTAGTGGA
(
2
)
9.6
0.0096
ONL
GCGACGGGCA
(
3
)
5.7
0.0057
ONL
AATTTGATGC
(
3
)
1.9
0.0019
ONL
CCCTGACTTC
(
3
)
1.9
0.0019
