Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.159989
A230104H11Rik
RIKEN cDNA A230104H11 gene
1
77759
Mm.159989
2810022L02Rik
RIKEN cDNA 2810022L02 gene
1
67198
Human Homolog
DNAPTP6[DNA polymerase-transactivated protein 6]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 36 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGAATGAT
(
4
)
9.8
0.0098
P8 Cb GC
TTGAGATTTT
(
3
)
3.3
0.0033
P8 Cb GC
TTAGCCAGCC
(
3
)
1.6
0.0016
Cb medulloblastoma
TGTGAATGAT
(
4
)
23.1
0.0231
P8 GC+1d culture
TGTGAATGAT
(
4
)
17.1
0.0171
P8 GC+1d culture
TGGCCAAGGG
(
2
)
1.1
0.0011
P8 GC+1d culture
TTAGCCAGCC
(
3
)
1.1
0.0011
P8 GC+1d culture
TTGAGATTTT
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTGAATGAT
(
4
)
16.4
0.0164
E15 cortex
TGTGAATGAT
(
4
)
4.9
0.0049
P1 cortex
TGTGAATGAT
(
4
)
9.1
0.0091
Hypothalamus
TGTGAATGAT
(
4
)
21.7
0.0217
Hypothalamus
TGGCCAAGGG
(
2
)
3.6
0.0036
Hypothalamus
TTGAGATTTT
(
3
)
1.8
0.0018
E12.5 retina
TGTGAATGAT
(
4
)
11.3
0.0113
E12.5 retina
TGGCCAAGGG
(
2
)
1.9
0.0019
E14.5 retina
TGTGAATGAT
(
4
)
3.6
0.0036
E14.5 retina
TTGAGATTTT
(
3
)
3.6
0.0036
E16.5 retina
TGTGAATGAT
(
4
)
14.5
0.0145
E16.5 retina
TTGAGATTTT
(
3
)
3.6
0.0036
E18.5 retina
TGTGAATGAT
(
4
)
14.6
0.0146
P0.5 retina
TGTGAATGAT
(
4
)
15.7
0.0157
P0.5 retina
TTGAGATTTT
(
3
)
2
0.002
P2.5 retina
TGTGAATGAT
(
4
)
19.4
0.0194
P2.5 retina
TTGAGATTTT
(
3
)
1.8
0.0018
P4.5 retina
TGTGAATGAT
(
4
)
27.7
0.0277
P4.5 retina
TTGAGATTTT
(
3
)
7.9
0.0079
P6.5 retina
TGTGAATGAT
(
4
)
18.3
0.0183
P10.5 crx- retina
TGTGAATGAT
(
4
)
14.9
0.0149
P10.5 crx- retina
TTAGCCAGCC
(
3
)
1.9
0.0019
P10.5 crx+ retina
TGTGAATGAT
(
4
)
21.1
0.0211
P10.5 crx+ retina
TTAGCCAGCC
(
3
)
1.9
0.0019
Adult retinal
TGTGAATGAT
(
4
)
5.6
0.0056
Adult retinal
TTGAGATTTT
(
3
)
1.9
0.0019
ONL
TGTGAATGAT
(
4
)
11.5
0.0115
ONL
TTGAGATTTT
(
3
)
5.7
0.0057
