Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.16660	P4hb	prolyl 4-hydroxylase, beta polypeptide	11	11 80.0 cM	18453
Gene Ontology	electron transport | electron transporter activity | endoplasmic reticulum | extracellular space | isomerase activity | peptidyl-proline hydroxylation to 4-hydroxy-L-proline | procollagen-proline 4-dioxygenase activity | procollagen-proline 4-dioxygenase activity | protein disulfide isomerase activity
Human Homolog	P4HB[procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), beta polypeptide (protein disulfide isomerase; thyroid hormone binding protein p55)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTGTGGCC 9.8 0.0098 P8 Cb GC TGGCCTGAGT 3.3 0.0033 P8 Cb GC CCCTGTGCCC (2) 1.6 0.0016 Cb medulloblastoma TGGCCTGAGT 30.1 0.0301 Cb medulloblastoma CTGGGCCGTG 2.3 0.0023 Cb medulloblastoma GCCTGTGGCC 2.3 0.0023 P8 GC+1d culture GCCTGTGGCC 19.4 0.0194 P8 GC+1d culture TGGCCTGAGT 11.4 0.0114 P8 GC+1d culture CTGGGCCGTG 3.4 0.0034 P8 GC+SHH+1d culture GCCTGTGGCC 15.2 0.0152 P8 GC+SHH+1d culture TGGCCTGAGT 5.9 0.0059 P8 GC+SHH+1d culture GAGGAAGACG 2.3 0.0023 P8 GC+SHH+1d culture CTGGGCCGTG 1.2 0.0012 3T3 fibroblasts GCCTGTGGCC 94.6 0.0946 3T3 fibroblasts CCCTGTGGCC (2) 24.5 0.0245 3T3 fibroblasts GAGGAAGACG 3.5 0.0035 E15 cortex CCCTGTGGCC (2) 14.8 0.0148 E15 cortex TGGCCTGAGT 14.8 0.0148 E15 cortex GCCTGTGGCC 9.9 0.0099 P1 cortex CTGGGCCGTG 13.6 0.0136 P1 cortex GCCTGTGGCC 4.5 0.0045 Hypothalamus CTGGGCCGTG 10.9 0.0109 Hypothalamus TGGCCTGAGT 9.1 0.0091 Hypothalamus GAGGAAGACG 1.8 0.0018 E12.5 retina GCCTGTGGCC 15 0.015 E12.5 retina TTGAAATGGC 5.6 0.0056 E12.5 retina CCCTGTGGCC (2) 1.9 0.0019 E12.5 retina CTGGGCCGTG 1.9 0.0019 E12.5 retina TGGCCTGAGT 1.9 0.0019 E14.5 retina GCCTGTGGCC 10.9 0.0109 E14.5 retina CTGGAAAAGA (2) 3.6 0.0036 E16.5 retina GCCTGTGGCC 32.6 0.0326 E16.5 retina TGGCCTGAGT 3.6 0.0036 E16.5 retina CCCTGTGCCC (2) 1.8 0.0018 E16.5 retina CTGGGCCGTG 1.8 0.0018 E16.5 retina TTGAAATGGC 1.8 0.0018 E18.5 retina GCCTGTGGCC 14.6 0.0146 E18.5 retina TTGAAATGGC 5.5 0.0055 E18.5 retina CTGGGCCGTG 3.6 0.0036 E18.5 retina TGGCCTGAGT 3.6 0.0036 E18.5 retina CTGGAAAAGA (2) 1.8 0.0018 P0.5 retina GCCTGTGGCC 19.6 0.0196 P0.5 retina TGGCCTGAGT 9.8 0.0098 P0.5 retina CCCTGTGGCC (2) 2 0.002 P2.5 retina GCCTGTGGCC 17.6 0.0176 P2.5 retina TGGCCTGAGT 8.8 0.0088 P2.5 retina CTGGGCCGTG 3.5 0.0035 P2.5 retina TTGAAATGGC 3.5 0.0035 P2.5 retina GAGGAAGACG 1.8 0.0018 P4.5 retina TGGCCTGAGT 17.8 0.0178 P4.5 retina GCCTGTGGCC 15.9 0.0159 P6.5 retina GCCTGTGGCC 13.3 0.0133 P6.5 retina CTGGGCCGTG 6.7 0.0067 P6.5 retina TGGCCTGAGT 6.7 0.0067 P6.5 retina CTGGAAAAGA (2) 3.3 0.0033 P10.5 crx- retina TGGCCTGAGT 11.1 0.0111 P10.5 crx- retina GCCTGTGGCC 9.3 0.0093 P10.5 crx- retina CCCTGTGCCC (2) 1.9 0.0019 P10.5 crx- retina GAGGAAGACG 1.9 0.0019 P10.5 crx+ retina GCCTGTGGCC 23.1 0.0231 P10.5 crx+ retina TGGCCTGAGT 23.1 0.0231 Adult retinal TGGCCTGAGT 16.7 0.0167 Adult retinal CTGGGCCGTG 1.9 0.0019 Adult retinal GCCTGTGGCC 1.9 0.0019 ONL GCCTGTGGCC 7.7 0.0077 ONL TGGCCTGAGT 3.8 0.0038