Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.169673
AI642036
expressed sequence AI642036
11
216705
Mm.169673
9530029O12Rik
RIKEN cDNA 9530029O12 gene
11
399629
Mm.169673
C530049I24Rik
RIKEN cDNA C530049I24 gene
11
320445
Mm.169673
C80165
expressed sequence C80165
11
97726
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATGTTCTGTT
(
4
)
6.5
0.0065
P8 Cb GC
CTTGAAAAGG
(
6
)
3.3
0.0033
P8 Cb GC
GCTATGTCTT
(
6
)
1.6
0.0016
P8 Cb GC
TGAGCTTAAT
(
4
)
1.6
0.0016
Cb medulloblastoma
ATGTTCTGTT
(
4
)
2.3
0.0023
P8 GC+1d culture
CTTGAAAAGG
(
6
)
8
0.008
P8 GC+1d culture
ATGTTCTGTT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
ATGTTCTGTT
(
4
)
5.9
0.0059
P8 GC+SHH+1d culture
CTTGAAAAGG
(
6
)
1.2
0.0012
P8 GC+SHH+1d culture
TGTTAGGTGG
(
4
)
1.2
0.0012
E15 cortex
ATGTTCTGTT
(
4
)
4.9
0.0049
P1 cortex
ATGTTCTGTT
(
4
)
4.5
0.0045
Hypothalamus
ATGTTCTGTT
(
4
)
5.4
0.0054
Hypothalamus
GCTATGTCTT
(
6
)
1.8
0.0018
E12.5 retina
ATGTTCTGTT
(
4
)
3.8
0.0038
E12.5 retina
TGAGCTTAAT
(
4
)
1.9
0.0019
E14.5 retina
ATGTTCTGTT
(
4
)
9.1
0.0091
E14.5 retina
CTTGAAAAGG
(
6
)
1.8
0.0018
E16.5 retina
ATGTTCTGTT
(
4
)
10.9
0.0109
E18.5 retina
ATGTTCTGTT
(
4
)
10.9
0.0109
E18.5 retina
TGAGCTTAAT
(
4
)
1.8
0.0018
P0.5 retina
ATGTTCTGTT
(
4
)
3.9
0.0039
P0.5 retina
TGTTAGGTGG
(
4
)
2
0.002
P2.5 retina
ATGTTCTGTT
(
4
)
14.1
0.0141
P2.5 retina
TGAGCTTAAT
(
4
)
1.8
0.0018
P4.5 retina
ATGTTCTGTT
(
4
)
9.9
0.0099
P6.5 retina
ATGTTCTGTT
(
4
)
6.7
0.0067
P6.5 retina
GCTATGTCTT
(
6
)
1.7
0.0017
P10.5 crx- retina
CTTGAAAAGG
(
6
)
13
0.013
P10.5 crx- retina
ATGTTCTGTT
(
4
)
7.4
0.0074
P10.5 crx- retina
TGTTAGGTGG
(
4
)
1.9
0.0019
P10.5 crx+ retina
ATGTTCTGTT
(
4
)
5.8
0.0058
P10.5 crx+ retina
CTTGAAAAGG
(
6
)
3.8
0.0038
Adult retinal
ATGTTCTGTT
(
4
)
3.7
0.0037
Adult retinal
CTTGAAAAGG
(
6
)
3.7
0.0037
ONL
ATGTTCTGTT
(
4
)
5.7
0.0057
ONL
CTTGAAAAGG
(
6
)
5.7
0.0057
ONL
TGTTAGGTGG
(
4
)
1.9
0.0019
