Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.173286	Tnpo1	transportin 1	13	13 53.0 cM	238799
Gene Ontology	cytoplasm | nuclear pore | nucleus | protein transport | protein transporter activity | protein-nucleus import, docking | transport
Human Homolog	TNPO1[transportin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGAGAATAT 8.2 0.0082 P8 Cb GC CTGATGAAGA (2) 1.6 0.0016 P8 Cb GC GCTAGCTACA 1.6 0.0016 P8 Cb GC TATAGTGCCC 1.6 0.0016 P8 Cb GC TTTAAGCATC 1.6 0.0016 Cb medulloblastoma ATCCAAAACA 2.3 0.0023 Cb medulloblastoma CAGAGAATAT 2.3 0.0023 Cb medulloblastoma TTTAAGCATC 2.3 0.0023 P8 GC+1d culture CAGAGAATAT 10.3 0.0103 P8 GC+1d culture CCGACGCGCC 2.3 0.0023 P8 GC+1d culture CTGATGAAGA (2) 2.3 0.0023 P8 GC+1d culture GCTAGCTACA 1.1 0.0011 P8 GC+1d culture TTTAAGCATC 1.1 0.0011 P8 GC+SHH+1d culture CAGAGAATAT 5.9 0.0059 P8 GC+SHH+1d culture GGGCACATAC 1.2 0.0012 P8 GC+SHH+1d culture TTAACATTGG 1.2 0.0012 3T3 fibroblasts ATGATGAAGG (2) 3.5 0.0035 3T3 fibroblasts CCGACGCGCC 3.5 0.0035 P1 cortex TCTCTATTAA 18.2 0.0182 P1 cortex CAGAGAATAT 4.5 0.0045 E12.5 retina CAGAGAATAT 5.6 0.0056 E12.5 retina TTTAAGCATC 3.8 0.0038 E12.5 retina CTGATGAAGA (2) 1.9 0.0019 E14.5 retina CAGAGAATAT 7.3 0.0073 E14.5 retina ATGATGAAGG (2) 1.8 0.0018 E14.5 retina CTGATGAAGA (2) 1.8 0.0018 E14.5 retina GGGCACATAC 1.8 0.0018 E14.5 retina TATAGTGCCC 1.8 0.0018 E14.5 retina TTTAAGCATC 1.8 0.0018 E16.5 retina CAGAGAATAT 3.6 0.0036 E16.5 retina AGGAGGATGG 1.8 0.0018 E16.5 retina GGGCACATAC 1.8 0.0018 E16.5 retina TCTCTATTAA 1.8 0.0018 E16.5 retina TTAACATTGG 1.8 0.0018 E16.5 retina TTTAAGCATC 1.8 0.0018 E18.5 retina CAGAGAATAT 7.3 0.0073 P0.5 retina TCTCTATTAA 3.9 0.0039 P0.5 retina TTTAAGCATC 3.9 0.0039 P0.5 retina CAGAGAATAT 2 0.002 P0.5 retina CTGATGAAGA (2) 2 0.002 P0.5 retina GGGCACATAC 2 0.002 P2.5 retina CAGAGAATAT 8.8 0.0088 P2.5 retina GGGCACATAC 3.5 0.0035 P2.5 retina CCGACGCGCC 1.8 0.0018 P2.5 retina CTGATGAAGA (2) 1.8 0.0018 P2.5 retina GCTAGCTACA 1.8 0.0018 P4.5 retina CAGAGAATAT 15.9 0.0159 P4.5 retina CCGACGCGCC 4 0.004 P4.5 retina ATCCAAAACA 2 0.002 P4.5 retina CTGATGAAGA (2) 2 0.002 P4.5 retina GCTAGCTACA 2 0.002 P4.5 retina TCTCTATTAA 2 0.002 P4.5 retina TTTAAGCATC 2 0.002 P6.5 retina CAGAGAATAT 6.7 0.0067 P6.5 retina CCGACGCGCC 1.7 0.0017 P6.5 retina CTGATGAAGA (2) 1.7 0.0017 P6.5 retina TTTAAGCATC 1.7 0.0017 P10.5 crx- retina CAGAGAATAT 7.4 0.0074 P10.5 crx- retina GGGCACATAC 3.7 0.0037 P10.5 crx- retina TTAACATTGG 3.7 0.0037 P10.5 crx- retina CTGATGAAGA (2) 1.9 0.0019 P10.5 crx- retina TCTCTATTAA 1.9 0.0019 P10.5 crx- retina TTTAAGCATC 1.9 0.0019 P10.5 crx+ retina GCTAGCTACA 3.8 0.0038 P10.5 crx+ retina CAGAGAATAT 1.9 0.0019 P10.5 crx+ retina CCGACGCGCC 1.9 0.0019 P10.5 crx+ retina GGGCACATAC 1.9 0.0019 P10.5 crx+ retina TATAGTGCCC 1.9 0.0019 P10.5 crx+ retina TTTAAGCATC 1.9 0.0019 Adult retinal TCTCTATTAA 5.6 0.0056 Adult retinal CAGAGAATAT 3.7 0.0037 Adult retinal GCTAGCTACA 3.7 0.0037 Adult retinal TTTAAGCATC 3.7 0.0037 ONL CAGAGAATAT 15.3 0.0153 ONL AGGAGGATGG 3.8 0.0038 ONL GCTAGCTACA 3.8 0.0038 ONL TATAGTGCCC 3.8 0.0038 ONL ATCCAAAACA 1.9 0.0019 ONL ATGATGAAGG (2) 1.9 0.0019 ONL CCGACGCGCC 1.9 0.0019 ONL CTGATGAAGA (2) 1.9 0.0019 ONL TCTCTATTAA 1.9 0.0019