Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.181278
D6Ertd286e
DNA segment, Chr 6, ERATO Doi 286, expressed
6
6 31.5 cM
52220
Mm.181278
Vps24
vacuolar protein sorting 24 (yeast)
6
66700
Human Homolog
VPS24[vacuolar protein sorting 24 (yeast)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 32 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACAAATTCTG
(
2
)
1.6
0.0016
P8 Cb GC
AGAAAATGGA
(
2
)
1.6
0.0016
Cb medulloblastoma
AAGCAATTTT
(
2
)
4.6
0.0046
Cb medulloblastoma
ACCTGTCTGC
(
3
)
4.6
0.0046
Cb medulloblastoma
ACAAATTCTG
(
2
)
2.3
0.0023
P8 GC+1d culture
AAGCAATTTT
(
2
)
4.6
0.0046
P8 GC+1d culture
ACCTGTCTGC
(
3
)
1.1
0.0011
P8 GC+1d culture
TCAACATTGT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
ACCTGTCTGC
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
AAGCAATTTT
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
ACAAATTCTG
(
2
)
1.2
0.0012
3T3 fibroblasts
ACCTGTCTGC
(
3
)
3.5
0.0035
E15 cortex
AAGCAATTTT
(
2
)
4.9
0.0049
Hypothalamus
ACCTGTCTGC
(
3
)
1.8
0.0018
E12.5 retina
ACCTGTCTGC
(
3
)
3.8
0.0038
E14.5 retina
AGAAAATGGA
(
2
)
1.8
0.0018
E16.5 retina
TCAACATTGT
(
2
)
1.8
0.0018
E18.5 retina
AGAAAATGGA
(
2
)
1.8
0.0018
E18.5 retina
TCAACATTGT
(
2
)
1.8
0.0018
P0.5 retina
ACAAATTCTG
(
2
)
2
0.002
P0.5 retina
AGAAAATGGA
(
2
)
2
0.002
P2.5 retina
ACCTGTCTGC
(
3
)
1.8
0.0018
P2.5 retina
AGAAAATGGA
(
2
)
1.8
0.0018
P4.5 retina
AAGCAATTTT
(
2
)
4
0.004
P4.5 retina
ACCTGTCTGC
(
3
)
4
0.004
P4.5 retina
GGCTTTCCTT
(
2
)
2
0.002
P6.5 retina
TCAACATTGT
(
2
)
1.7
0.0017
P10.5 crx- retina
TCAACATTGT
(
2
)
1.9
0.0019
P10.5 crx+ retina
ACCTGTCTGC
(
3
)
1.9
0.0019
P10.5 crx+ retina
AGAAAATGGA
(
2
)
1.9
0.0019
Adult retinal
AGAAAATGGA
(
2
)
1.9
0.0019
ONL
GGCTTTCCTT
(
2
)
3.8
0.0038
