Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.182912	Ghitm	growth hormone inducible transmembrane protein	14	14 15.0 cM	66092
Gene Ontology	integral to membrane
Human Homolog	GHITM[growth hormone inducible transmembrane protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 112 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTTCCTT (2) 14.7 0.0147 P8 Cb GC CCTTTTCTTT 3.3 0.0033 P8 Cb GC AACAAAGCAA (2) 1.6 0.0016 P8 Cb GC TGTGCGCCCT (3) 1.6 0.0016 P8 Cb GC TTTAAAATGT (2) 1.6 0.0016 Cb medulloblastoma CCTTTTCCTT (2) 18.5 0.0185 Cb medulloblastoma CCTTTTTTTT (2) 6.9 0.0069 Cb medulloblastoma TGTGCGCCCT (3) 6.9 0.0069 Cb medulloblastoma AACAAAGCAA (2) 4.6 0.0046 Cb medulloblastoma CTTTCAATTA 4.6 0.0046 Cb medulloblastoma ACTGGGCATT 2.3 0.0023 Cb medulloblastoma TTGGCTGCAA 2.3 0.0023 P8 GC+1d culture CCTTTTCCTT (2) 9.1 0.0091 P8 GC+1d culture CCTTTTCTTT 9.1 0.0091 P8 GC+1d culture AACAAAGCAA (2) 5.7 0.0057 P8 GC+1d culture TTTAAAATGT (2) 3.4 0.0034 P8 GC+1d culture ACTGGGCATT 1.1 0.0011 P8 GC+1d culture CTTCCAATTA (2) 1.1 0.0011 P8 GC+1d culture CTTTCAATTA 1.1 0.0011 P8 GC+1d culture TGTGCGCCCT (3) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTTCCTT (2) 9.4 0.0094 P8 GC+SHH+1d culture CCTTTTCTTT 4.7 0.0047 P8 GC+SHH+1d culture CTTCCAATTA (2) 4.7 0.0047 P8 GC+SHH+1d culture GGATGGGGAT 3.5 0.0035 P8 GC+SHH+1d culture TGTGCGCCCT (3) 3.5 0.0035 P8 GC+SHH+1d culture CCTTTTTTTT (2) 1.2 0.0012 P8 GC+SHH+1d culture CTTTCAATTA 1.2 0.0012 P8 GC+SHH+1d culture TTTAAAATGT (2) 1.2 0.0012 3T3 fibroblasts TGTGCGCCCT (3) 7 0.007 3T3 fibroblasts CTTTTCTTTT (2) 3.5 0.0035 3T3 fibroblasts TTGGCTGCAA 3.5 0.0035 E15 cortex CCTTTTCCTT (2) 19.8 0.0198 E15 cortex TGTGCGCCCT (3) 9.9 0.0099 E15 cortex AACAATTCAA 4.9 0.0049 P1 cortex CCTTTTCCTT (2) 22.7 0.0227 P1 cortex TTTAAAATGT (2) 4.5 0.0045 Hypothalamus CCTTTTCCTT (2) 9.1 0.0091 Hypothalamus AACAAAGCAA (2) 3.6 0.0036 Hypothalamus AGTGACAAGT 1.8 0.0018 Hypothalamus CCTTTTCTTT 1.8 0.0018 Hypothalamus TGGGCTGCAA 1.8 0.0018 Hypothalamus TGTGCGCCCT (3) 1.8 0.0018 E12.5 retina CCTTTTCCTT (2) 16.9 0.0169 E12.5 retina CCTTTTCTTT 3.8 0.0038 E12.5 retina CTTTTCTTTT (2) 3.8 0.0038 E12.5 retina CCTTTTTTTT (2) 1.9 0.0019 E14.5 retina CCTTTTCCTT (2) 12.8 0.0128 E14.5 retina TGTGCGCCCT (3) 7.3 0.0073 E14.5 retina TTTAAAATGT (2) 3.6 0.0036 E16.5 retina CCTTTTCCTT (2) 23.5 0.0235 E16.5 retina TGTGCGCCCT (3) 12.7 0.0127 E16.5 retina CTGAAAAGAA 3.6 0.0036 E16.5 retina AACAAAGCAA (2) 1.8 0.0018 E16.5 retina ACTGGGCATT 1.8 0.0018 E16.5 retina ATTAAAGATA 1.8 0.0018 E16.5 retina CCTTTTCTTT 1.8 0.0018 E16.5 retina CCTTTTTTTT (2) 1.8 0.0018 E16.5 retina TTTAAAATGT (2) 1.8 0.0018 E18.5 retina CCTTTTCCTT (2) 9.1 0.0091 E18.5 retina CCTTTTCTTT 7.3 0.0073 E18.5 retina AACAAAGCAA (2) 1.8 0.0018 E18.5 retina CCTTTTTTTT (2) 1.8 0.0018 E18.5 retina TGTGCGCCCT (3) 1.8 0.0018 P0.5 retina CCTTTTCCTT (2) 9.8 0.0098 P0.5 retina TGTGCGCCCT (3) 5.9 0.0059 P0.5 retina ATTAAAGATA 2 0.002 P0.5 retina CCTTTTTTTT (2) 2 0.002 P0.5 retina TGGGCTGCAA 2 0.002 P2.5 retina CCTTTTCCTT (2) 14.1 0.0141 P2.5 retina TGTGCGCCCT (3) 8.8 0.0088 P2.5 retina CCTTTTCTTT 5.3 0.0053 P2.5 retina AACAAAGCAA (2) 1.8 0.0018 P2.5 retina CTTTTCTTTT (2) 1.8 0.0018 P2.5 retina TTTAAAATGT (2) 1.8 0.0018 P4.5 retina CCTTTTCCTT (2) 13.9 0.0139 P4.5 retina AACAAAGCAA (2) 2 0.002 P4.5 retina AACAATTCAA 2 0.002 P4.5 retina CCTTTTTTTT (2) 2 0.002 P4.5 retina TGTGCGCCCT (3) 2 0.002 P4.5 retina TTTAAAATGT (2) 2 0.002 P6.5 retina CCTTTTCCTT (2) 6.7 0.0067 P6.5 retina AACAAAGCAA (2) 5 0.005 P6.5 retina CCTTTTCTTT 3.3 0.0033 P6.5 retina TGTGCGCCCT (3) 3.3 0.0033 P6.5 retina ACTCCCTGTC 1.7 0.0017 P6.5 retina CTTTCAATTA 1.7 0.0017 P10.5 crx- retina CCTTTTCCTT (2) 26 0.026 P10.5 crx- retina AACAAAGCAA (2) 16.7 0.0167 P10.5 crx- retina TGTGCGCCCT (3) 7.4 0.0074 P10.5 crx- retina CCTTTTCTTT 3.7 0.0037 P10.5 crx- retina ACTCCCTGTC 1.9 0.0019 P10.5 crx- retina AGTGACAAGT 1.9 0.0019 P10.5 crx- retina CCTTTTTTTT (2) 1.9 0.0019 P10.5 crx- retina TTTAAAATGT (2) 1.9 0.0019 P10.5 crx+ retina CCTTTTCCTT (2) 7.7 0.0077 P10.5 crx+ retina AACAATTCAA 1.9 0.0019 P10.5 crx+ retina ACTCCCTGTC 1.9 0.0019 P10.5 crx+ retina ACTGGGCATT 1.9 0.0019 P10.5 crx+ retina TGGGCTGCAA 1.9 0.0019 P10.5 crx+ retina TGTGCGCCCT (3) 1.9 0.0019 P10.5 crx+ retina TTTAAAATGT (2) 1.9 0.0019 Adult retinal CCTTTTCCTT (2) 20.4 0.0204 Adult retinal ACTGGGCATT 3.7 0.0037 Adult retinal CCTTTTCTTT 3.7 0.0037 Adult retinal TTTAAAATGT (2) 3.7 0.0037 Adult retinal ATTAAAGATA 1.9 0.0019 ONL CCTTTTCCTT (2) 13.4 0.0134 ONL AACAAAGCAA (2) 11.5 0.0115 ONL CTTTCAATTA 5.7 0.0057 ONL AACAATTCAA 1.9 0.0019 ONL AGTGACAAGT 1.9 0.0019 ONL TTGGCTGCAA 1.9 0.0019