Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.184021	Ptprd	protein tyrosine phosphatase, receptor type, D	4	4 38.0 cM	19266
Gene Ontology	hydrolase activity | integral to membrane | plasma membrane | protein-tyrosine-phosphatase activity | receptor activity | transmembrane receptor protein tyrosine phosphatase signaling pathway
Human Homolog	PTPRD[protein tyrosine phosphatase, receptor type, D]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAGGGTATT (2) 4.9 0.0049 P8 Cb GC GAGTCTCTTC 4.9 0.0049 P8 Cb GC TTGTGTCAGC 1.6 0.0016 Cb medulloblastoma GAAGGGTATT (2) 4.6 0.0046 Cb medulloblastoma GAGTCTCTTC 2.3 0.0023 P8 GC+1d culture GAGTCTCTTC 2.3 0.0023 P8 GC+1d culture GAAGGGTATT (2) 1.1 0.0011 P8 GC+SHH+1d culture GAGTCTCTTC 1.2 0.0012 E15 cortex GAAGGGTATT (2) 4.9 0.0049 P1 cortex GAGTCTCTTC 22.7 0.0227 Hypothalamus GAAGGGTATT (2) 3.6 0.0036 E12.5 retina GAGTCTCTTC 5.6 0.0056 E12.5 retina GAAGGGTATT (2) 1.9 0.0019 E14.5 retina GAAGGGTATT (2) 1.8 0.0018 E16.5 retina GAGTCTCTTC 5.4 0.0054 E16.5 retina GAAGGGTATT (2) 1.8 0.0018 E18.5 retina GAAGGGTATT (2) 7.3 0.0073 E18.5 retina GAGTCTCTTC 3.6 0.0036 P0.5 retina GAAGGGTATT (2) 2 0.002 P2.5 retina GAGTCTCTTC 8.8 0.0088 P2.5 retina GAAGGGTATT (2) 5.3 0.0053 P2.5 retina TTGTGTCAGC 1.8 0.0018 P4.5 retina GAAGGGTATT (2) 5.9 0.0059 P4.5 retina GAGTCTCTTC 4 0.004 P6.5 retina GAGTCTCTTC 11.7 0.0117 P6.5 retina GAAGGGTATT (2) 3.3 0.0033 P6.5 retina TTGTGTCAGC 1.7 0.0017 P10.5 crx- retina GAGTCTCTTC 7.4 0.0074 P10.5 crx- retina GAAGGGTATT (2) 3.7 0.0037 P10.5 crx+ retina GAGTCTCTTC 7.7 0.0077 P10.5 crx+ retina GAAGGGTATT (2) 3.8 0.0038 P10.5 crx+ retina TTGTGTCAGC 1.9 0.0019 ONL GAAGGGTATT (2) 1.9 0.0019