Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.184711	4930449I21Rik	RIKEN cDNA 4930449I21 gene	2		73966
Mm.184711	AW120700	expressed sequence AW120700	2		99327
Mm.184711	Cdh4	cadherin 4	2	2 106.0 cM	12561
Gene Ontology	axon guidance | calcium ion binding | cell adhesion | extracellular space | homophilic cell adhesion | integral to membrane | membrane | positive regulation of axon extension | protein binding
Human Homolog	CDH4[cadherin 4, type 1, R-cadherin (retinal)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGAAAATAA (3) 8.2 0.0082 P8 Cb GC ACCGTGGTTG (3) 1.6 0.0016 P8 Cb GC CGGTGAGACA (3) 1.6 0.0016 Cb medulloblastoma CGGTGAGACA (3) 4.6 0.0046 Cb medulloblastoma CAGAAAATAA (3) 2.3 0.0023 P8 GC+1d culture CAGAAAATAA (3) 8 0.008 P8 GC+1d culture CGGTGAGACA (3) 1.1 0.0011 P8 GC+SHH+1d culture CAGAAAATAA (3) 19.9 0.0199 E15 cortex ACAGATTCCC (3) 4.9 0.0049 P1 cortex ACCGTGGTTG (3) 4.5 0.0045 Hypothalamus CAGAAAATAA (3) 1.8 0.0018 Hypothalamus CGGTGAGACA (3) 1.8 0.0018 E12.5 retina CGGTGAGACA (3) 5.6 0.0056 E12.5 retina CAGAAAATAA (3) 1.9 0.0019 E14.5 retina CGGTGAGACA (3) 9.1 0.0091 E14.5 retina ACAGATTCCC (3) 3.6 0.0036 E16.5 retina CGGTGAGACA (3) 10.9 0.0109 E16.5 retina CAGAAAATAA (3) 1.8 0.0018 E16.5 retina TGGAGCTCTG (3) 1.8 0.0018 E18.5 retina CAGAAAATAA (3) 5.5 0.0055 E18.5 retina CGGTGAGACA (3) 3.6 0.0036 P0.5 retina ACCGTGGTTG (3) 3.9 0.0039 P0.5 retina ACAGATTCCC (3) 2 0.002 P0.5 retina CAGAAAATAA (3) 2 0.002 P0.5 retina CGGTGAGACA (3) 2 0.002 P0.5 retina TGGAGCTCTG (3) 2 0.002 P2.5 retina CGGTGAGACA (3) 10.6 0.0106 P2.5 retina CAGAAAATAA (3) 3.5 0.0035 P2.5 retina TGGAGCTCTG (3) 1.8 0.0018 P4.5 retina CAGAAAATAA (3) 7.9 0.0079 P4.5 retina CGGTGAGACA (3) 2 0.002 P4.5 retina TGGAGCTCTG (3) 2 0.002 P6.5 retina CGGTGAGACA (3) 5 0.005 P6.5 retina CAGAAAATAA (3) 1.7 0.0017 P10.5 crx- retina ACAGATTCCC (3) 1.9 0.0019 P10.5 crx- retina CGGTGAGACA (3) 1.9 0.0019 P10.5 crx+ retina CGGTGAGACA (3) 7.7 0.0077 Adult retinal CGGTGAGACA (3) 1.9 0.0019 ONL CAGAAAATAA (3) 3.8 0.0038 ONL CGGTGAGACA (3) 1.9 0.0019