Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.185453	E130105L11Rik	RIKEN cDNA E130105L11 gene	7		77989
Mm.185453	1700012D14Rik	RIKEN cDNA 1700012D14 gene	7		75479
Mm.185453	Eif4g2	eukaryotic translation initiation factor 4, gamma 2	7	7 51.52 cM	13690
Gene Ontology	cytoplasm | protein biosynthesis | regulation of protein biosynthesis | regulation of translation | regulation of translational initiation | RNA binding | translation initiation factor activity
Human Homolog	EIF4G2[eukaryotic translation initiation factor 4 gamma, 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 106 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTGATTTT (3) 50.6 0.0506 P8 Cb GC ATAACTGAGT (5) 32.6 0.0326 P8 Cb GC CAGGCTTTCC (4) 4.9 0.0049 P8 Cb GC ACTTCAAATA (3) 1.6 0.0016 P8 Cb GC GTTTACTTGC (3) 1.6 0.0016 P8 Cb GC GTTTAGAACC (3) 1.6 0.0016 Cb medulloblastoma CCCTGATTTT (3) 25.4 0.0254 Cb medulloblastoma ATAACTGAGT (5) 23.1 0.0231 Cb medulloblastoma CAGCAGTTTT (3) 2.3 0.0023 Cb medulloblastoma GTTTACTTGC (3) 2.3 0.0023 P8 GC+1d culture CCCTGATTTT (3) 45.7 0.0457 P8 GC+1d culture ATAACTGAGT (5) 18.3 0.0183 P8 GC+1d culture CTGCTAATAT (3) 3.4 0.0034 P8 GC+1d culture CAGGCTTTCC (4) 2.3 0.0023 P8 GC+1d culture GTTTACTTGC (3) 2.3 0.0023 P8 GC+1d culture CAATAATTAC (3) 1.1 0.0011 P8 GC+1d culture CAGCAGTTTT (3) 1.1 0.0011 P8 GC+1d culture CAGTCAATCA (3) 1.1 0.0011 P8 GC+1d culture GAATCCAGAG (3) 1.1 0.0011 P8 GC+SHH+1d culture CCCTGATTTT (3) 35.1 0.0351 P8 GC+SHH+1d culture ATAACTGAGT (5) 21.1 0.0211 P8 GC+SHH+1d culture CAGCAGTTTT (3) 1.2 0.0012 P8 GC+SHH+1d culture CTGCTAATAT (3) 1.2 0.0012 P8 GC+SHH+1d culture GAATCCAGAG (3) 1.2 0.0012 P8 GC+SHH+1d culture GTTTACTTGC (3) 1.2 0.0012 3T3 fibroblasts CCCTGATTTT (3) 7 0.007 E15 cortex CCCTGATTTT (3) 24.7 0.0247 E15 cortex ATAACTGAGT (5) 14.8 0.0148 E15 cortex CCCCTGATTT (3) 4.9 0.0049 E15 cortex GAAATTATTG (3) 4.9 0.0049 E15 cortex GTTTAGAACC (3) 4.9 0.0049 P1 cortex CCCTGATTTT (3) 50 0.05 P1 cortex ATAACTGAGT (5) 9.1 0.0091 P1 cortex ACTTCAAATA (3) 4.5 0.0045 Hypothalamus ATAACTGAGT (5) 7.2 0.0072 Hypothalamus CCCTGATTTT (3) 7.2 0.0072 Hypothalamus CAGTCAATCA (3) 5.4 0.0054 Hypothalamus TAGATAAAGG (3) 3.6 0.0036 E12.5 retina CCCTGATTTT (3) 28.2 0.0282 E12.5 retina ATAACTGAGT (5) 13.1 0.0131 E12.5 retina ACTTCAAATA (3) 1.9 0.0019 E14.5 retina CCCTGATTTT (3) 41.9 0.0419 E14.5 retina ATAACTGAGT (5) 18.2 0.0182 E14.5 retina CTGCTAATAT (3) 3.6 0.0036 E14.5 retina GTTTACTTGC (3) 3.6 0.0036 E14.5 retina CAGCAGTTTT (3) 1.8 0.0018 E14.5 retina CAGGCTTTCC (4) 1.8 0.0018 E14.5 retina CCCTGATTTA (3) 1.8 0.0018 E16.5 retina CCCTGATTTT (3) 52.5 0.0525 E16.5 retina ATAACTGAGT (5) 16.3 0.0163 E16.5 retina GTTTACTTGC (3) 3.6 0.0036 E16.5 retina CAATAATTAC (3) 1.8 0.0018 E16.5 retina CAGTCAATCA (3) 1.8 0.0018 E16.5 retina CCCTGATTTA (3) 1.8 0.0018 E16.5 retina GAAATTATTG (3) 1.8 0.0018 E16.5 retina GTTTAGAACC (3) 1.8 0.0018 E18.5 retina CCCTGATTTT (3) 38.2 0.0382 E18.5 retina ATAACTGAGT (5) 9.1 0.0091 E18.5 retina CCCTGATTTA (3) 1.8 0.0018 E18.5 retina CTGCTAATAT (3) 1.8 0.0018 E18.5 retina GTTTACTTGC (3) 1.8 0.0018 P0.5 retina CCCTGATTTT (3) 33.4 0.0334 P0.5 retina ATAACTGAGT (5) 11.8 0.0118 P0.5 retina CAGGCTTTCC (4) 2 0.002 P0.5 retina CCCTGATTTA (3) 2 0.002 P2.5 retina CCCTGATTTT (3) 42.2 0.0422 P2.5 retina ATAACTGAGT (5) 21.1 0.0211 P4.5 retina CCCTGATTTT (3) 51.5 0.0515 P4.5 retina ATAACTGAGT (5) 15.9 0.0159 P4.5 retina CTGCTAATAT (3) 4 0.004 P4.5 retina GTTTACTTGC (3) 2 0.002 P6.5 retina CCCTGATTTT (3) 18.3 0.0183 P6.5 retina ATAACTGAGT (5) 13.3 0.0133 P6.5 retina CAGGCTTTCC (4) 3.3 0.0033 P6.5 retina ACTTCAAATA (3) 1.7 0.0017 P6.5 retina CAGCAGTTTT (3) 1.7 0.0017 P6.5 retina CCCCTGATTT (3) 1.7 0.0017 P10.5 crx- retina CCCTGATTTT (3) 22.3 0.0223 P10.5 crx- retina ATAACTGAGT (5) 9.3 0.0093 P10.5 crx- retina CAATAATTAC (3) 3.7 0.0037 P10.5 crx- retina CAGGCTTTCC (4) 3.7 0.0037 P10.5 crx- retina GAAATTATTG (3) 3.7 0.0037 P10.5 crx- retina TAGATAAAGG (3) 3.7 0.0037 P10.5 crx- retina ACTTCAAATA (3) 1.9 0.0019 P10.5 crx- retina CAGTCAATCA (3) 1.9 0.0019 P10.5 crx- retina GAATCCAGAG (3) 1.9 0.0019 P10.5 crx- retina GTTTACTTGC (3) 1.9 0.0019 P10.5 crx+ retina CCCTGATTTT (3) 23.1 0.0231 P10.5 crx+ retina ATAACTGAGT (5) 13.5 0.0135 P10.5 crx+ retina CAGTCAATCA (3) 3.8 0.0038 P10.5 crx+ retina GTTTACTTGC (3) 3.8 0.0038 P10.5 crx+ retina CAGGCTTTCC (4) 1.9 0.0019 P10.5 crx+ retina GAATCCAGAG (3) 1.9 0.0019 Adult retinal CCCTGATTTT (3) 14.8 0.0148 Adult retinal ATAACTGAGT (5) 7.4 0.0074 Adult retinal CAGGCTTTCC (4) 1.9 0.0019 Adult retinal CAGTCAATCA (3) 1.9 0.0019 Adult retinal CCCCTGATTT (3) 1.9 0.0019 Adult retinal GAATCCAGAG (3) 1.9 0.0019 Adult retinal GTTTACTTGC (3) 1.9 0.0019 Adult retinal GTTTAGAACC (3) 1.9 0.0019 ONL CCCTGATTTT (3) 23 0.023 ONL ATAACTGAGT (5) 3.8 0.0038 ONL ACTTCAAATA (3) 1.9 0.0019 ONL CAGCAGTTTT (3) 1.9 0.0019 ONL GAAATTATTG (3) 1.9 0.0019