Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.187079	A930006D20Rik	RIKEN cDNA A930006D20 gene	16		77939
Mm.187079	Synj1	synaptojanin 1	16		104015
Gene Ontology	clathrin coat | endocytosis | hydrolase activity | inositol/phosphatidylinositol phosphatase activity | membrane coat | neurotransmitter transport | phosphoinositide metabolism | phosphoinositide metabolism | phosphoinositide-mediated signaling | polyphosphoinositide phosphatase activity | polyphosphoinositide phosphatase activity | RNA binding
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGGGGTTCT (3) 3.3 0.0033 P8 Cb GC GAATTTTTAC (2) 1.6 0.0016 Cb medulloblastoma GAATTTTTAC (2) 11.6 0.0116 P8 GC+1d culture GAATTTTTAC (2) 2.3 0.0023 P8 GC+1d culture GTATTCTGTA (2) 2.3 0.0023 P8 GC+SHH+1d culture GAATTTTTAC (2) 1.2 0.0012 3T3 fibroblasts CAAGAGCACA (3) 3.5 0.0035 E15 cortex GAATTTTTAC (2) 9.9 0.0099 E15 cortex TGGTCTGTGA (4) 4.9 0.0049 P1 cortex GAATTTTTAC (2) 9.1 0.0091 P1 cortex GTATTCTGTA (2) 4.5 0.0045 Hypothalamus GAATTTTTAC (2) 5.4 0.0054 E12.5 retina GTATTCTGTA (2) 1.9 0.0019 E14.5 retina CAAGAGCACA (3) 1.8 0.0018 E14.5 retina GAATTTTTAC (2) 1.8 0.0018 E14.5 retina GTATTCTGTA (2) 1.8 0.0018 E14.5 retina TGGTCTGTGA (4) 1.8 0.0018 E16.5 retina CAAGAGCACA (3) 1.8 0.0018 E16.5 retina GAATTTTTAC (2) 1.8 0.0018 E18.5 retina GAATTTTTAC (2) 1.8 0.0018 E18.5 retina TGGTCTGTGA (4) 1.8 0.0018 P0.5 retina GTATTCTGTA (2) 2 0.002 P2.5 retina GTATTCTGTA (2) 3.5 0.0035 P4.5 retina CAAGAGCACA (3) 2 0.002 P4.5 retina GAATTTTTAC (2) 2 0.002 P4.5 retina GTATTCTGTA (2) 2 0.002 P6.5 retina GAATTTTTAC (2) 8.3 0.0083 P6.5 retina GTATTCTGTA (2) 1.7 0.0017 P6.5 retina TTGGGGTTCT (3) 1.7 0.0017 P10.5 crx- retina GTATTCTGTA (2) 1.9 0.0019 P10.5 crx+ retina GTATTCTGTA (2) 1.9 0.0019 Adult retinal TTGGGGTTCT (3) 1.9 0.0019 ONL GAATTTTTAC (2) 1.9 0.0019