Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.188851	Pdap1	PDGFA associated protein 1	5		231887
Human Homolog	PDAP1[PDGFA associated protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCCTCAAAT 24.5 0.0245 P8 Cb GC AAGATGCATT 6.5 0.0065 P8 Cb GC AAAGTGAAGA (2) 1.6 0.0016 P8 Cb GC GTAACCAGAG 1.6 0.0016 Cb medulloblastoma CTCCTCAAAT 11.6 0.0116 P8 GC+1d culture CTCCTCAAAT 14.8 0.0148 P8 GC+1d culture GTAACCAGAG 3.4 0.0034 P8 GC+1d culture TCTCACCCAC 2.3 0.0023 P8 GC+1d culture AAAGTGAAGA (2) 1.1 0.0011 P8 GC+1d culture AAGATGCATT 1.1 0.0011 P8 GC+SHH+1d culture CTCCTCAAAT 26.9 0.0269 P8 GC+SHH+1d culture GTAACCAGAG 4.7 0.0047 P8 GC+SHH+1d culture AGCAAAGATA (3) 1.2 0.0012 P8 GC+SHH+1d culture TCTCACCCAC 1.2 0.0012 3T3 fibroblasts CTCCTCAAAT 7 0.007 3T3 fibroblasts AAGATGCATT 3.5 0.0035 E15 cortex CTCCTCAAAT 24.7 0.0247 P1 cortex AGCAAAGATA (3) 9.1 0.0091 P1 cortex CTCCTCAAAT 9.1 0.0091 Hypothalamus CTCCTCAAAT 3.6 0.0036 Hypothalamus GTAACCAGAG 1.8 0.0018 Hypothalamus TCTCACCCAC 1.8 0.0018 E12.5 retina CTCCTCAAAT 15 0.015 E12.5 retina AAGATGCATT 11.3 0.0113 E12.5 retina TCTCACCCAC 1.9 0.0019 E12.5 retina TGGTAGTGGT (2) 1.9 0.0019 E14.5 retina CTCCTCAAAT 25.5 0.0255 E14.5 retina AAGATGCATT 5.5 0.0055 E14.5 retina GTAACCAGAG 3.6 0.0036 E14.5 retina AAAGTGAAGA (2) 1.8 0.0018 E14.5 retina TCTCACCCAC 1.8 0.0018 E16.5 retina CTCCTCAAAT 47.1 0.0471 E16.5 retina AAGATGCATT 1.8 0.0018 E16.5 retina AGCAAAGATA (3) 1.8 0.0018 E16.5 retina GTAACCAGAG 1.8 0.0018 E16.5 retina TGGTAGTGGT (2) 1.8 0.0018 E18.5 retina CTCCTCAAAT 34.6 0.0346 E18.5 retina GTAACCAGAG 5.5 0.0055 E18.5 retina AAGATGCATT 3.6 0.0036 E18.5 retina AAAGTGAAGA (2) 1.8 0.0018 E18.5 retina TGGTAGTGGT (2) 1.8 0.0018 P0.5 retina CTCCTCAAAT 21.6 0.0216 P0.5 retina GTAACCAGAG 3.9 0.0039 P0.5 retina AAGATGCATT 2 0.002 P0.5 retina AGCAAAGATA (3) 2 0.002 P0.5 retina TCTCACCCAC 2 0.002 P2.5 retina CTCCTCAAAT 22.9 0.0229 P2.5 retina AAGATGCATT 7 0.007 P2.5 retina GTAACCAGAG 3.5 0.0035 P2.5 retina AGCAAAGATA (3) 1.8 0.0018 P2.5 retina TGGTAGTGGT (2) 1.8 0.0018 P4.5 retina CTCCTCAAAT 27.7 0.0277 P4.5 retina AAGATGCATT 4 0.004 P4.5 retina GTAACCAGAG 2 0.002 P6.5 retina CTCCTCAAAT 23.3 0.0233 P6.5 retina AAGATGCATT 8.3 0.0083 P10.5 crx- retina CTCCTCAAAT 9.3 0.0093 P10.5 crx- retina AAAGTGAAGA (2) 1.9 0.0019 P10.5 crx- retina AGCAAAGATA (3) 1.9 0.0019 P10.5 crx+ retina CTCCTCAAAT 9.6 0.0096 P10.5 crx+ retina AGCAAAGATA (3) 1.9 0.0019 P10.5 crx+ retina GTAACCAGAG 1.9 0.0019 Adult retinal CTCCTCAAAT 7.4 0.0074 Adult retinal AAGATGCATT 3.7 0.0037 Adult retinal GTAACCAGAG 3.7 0.0037 ONL CTCCTCAAAT 5.7 0.0057 ONL AAGATGCATT 3.8 0.0038