Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.195625
2010002I07Rik
RIKEN cDNA 2010002I07 gene
1
72048
Mm.195625
2610205H19Rik
RIKEN cDNA 2610205H19 gene
1
70456
Human Homolog
DKFZP564B167[DKFZP564B167 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 33 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCAGACCTG
(
2
)
9.8
0.0098
P8 Cb GC
TTTCGGATTT
(
3
)
1.6
0.0016
Cb medulloblastoma
GCCAGACCTG
(
2
)
18.5
0.0185
Cb medulloblastoma
TTTCGGATTT
(
3
)
2.3
0.0023
P8 GC+1d culture
GCCAGACCTG
(
2
)
5.7
0.0057
P8 GC+1d culture
TTTCGGATTT
(
3
)
4.6
0.0046
P8 GC+SHH+1d culture
GCCAGACCTG
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TTTCGGATTT
(
3
)
1.2
0.0012
3T3 fibroblasts
GCCAGACCTG
(
2
)
17.5
0.0175
3T3 fibroblasts
CCCAGCCTTG
(
2
)
3.5
0.0035
E15 cortex
GCCAGACCTG
(
2
)
14.8
0.0148
P1 cortex
GCCAGACCTG
(
2
)
13.6
0.0136
Hypothalamus
GCCAGACCTG
(
2
)
3.6
0.0036
E12.5 retina
GCCAGACCTG
(
2
)
5.6
0.0056
E12.5 retina
CCCAGCCTTG
(
2
)
1.9
0.0019
E14.5 retina
GCCAGACCTG
(
2
)
1.8
0.0018
E14.5 retina
TTTCGGATTT
(
3
)
1.8
0.0018
E16.5 retina
GCCAGACCTG
(
2
)
1.8
0.0018
E18.5 retina
GCCAGACCTG
(
2
)
5.5
0.0055
P0.5 retina
GCCAGACCTG
(
2
)
11.8
0.0118
P2.5 retina
GCCAGACCTG
(
2
)
3.5
0.0035
P2.5 retina
TTTCGGATTT
(
3
)
1.8
0.0018
P4.5 retina
GCCAGACCTG
(
2
)
7.9
0.0079
P6.5 retina
GCCAGACCTG
(
2
)
6.7
0.0067
P6.5 retina
TTTCGGATTT
(
3
)
3.3
0.0033
P10.5 crx- retina
GCCAGACCTG
(
2
)
20.4
0.0204
P10.5 crx- retina
TTTCGGATTT
(
3
)
3.7
0.0037
P10.5 crx+ retina
GCCAGACCTG
(
2
)
7.7
0.0077
Adult retinal
GCCAGACCTG
(
2
)
9.3
0.0093
Adult retinal
TTTCGGATTT
(
3
)
3.7
0.0037
Adult retinal
CCCAGCCTTG
(
2
)
1.9
0.0019
ONL
GCCAGACCTG
(
2
)
3.8
0.0038
ONL
TTTCGGATTT
(
3
)
1.9
0.0019
