Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196110	Hba	hemoglobin alpha chain complex	11	11 16.0 cM	15121
Mm.196110	Hba-a1	hemoglobin alpha, adult chain 1	11	11 16.0 cM	15122
Gene Ontology	hemoglobin complex | mitochondrion | oxygen transport | oxygen transporter activity | transport
Human Homolog	HBA1[hemoglobin, alpha 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 131 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTTCTTCT (3) 63.6 0.0636 P8 Cb GC GCTTCTTCTG (4) 13.1 0.0131 P8 Cb GC CCGTTCTTCT (4) 4.9 0.0049 P8 Cb GC GCCACAAGCT (4) 3.3 0.0033 P8 Cb GC GTGCTGAATA (2) 3.3 0.0033 P8 Cb GC CCTCTCTGGA (2) 1.6 0.0016 P8 Cb GC GCACTTCTTC (4) 1.6 0.0016 P8 Cb GC TCCTTCTTCT (2) 1.6 0.0016 Cb medulloblastoma CCCTTCTTCT (3) 80.9 0.0809 Cb medulloblastoma GCTTCTTCTG (4) 23.1 0.0231 Cb medulloblastoma CCGTTCTTCT (4) 4.6 0.0046 Cb medulloblastoma GCCAGAAGGC (2) 4.6 0.0046 Cb medulloblastoma CCCACAAGCT (2) 2.3 0.0023 Cb medulloblastoma CCTCTCTGGA (2) 2.3 0.0023 P8 GC+1d culture CCCTTCTTCT (3) 12.6 0.0126 P8 GC+1d culture GCTTCTTCTG (4) 11.4 0.0114 P8 GC+1d culture CCCTTAATCT (3) 5.7 0.0057 P8 GC+1d culture CCGTTCTTCT (4) 4.6 0.0046 P8 GC+1d culture AAAGTAATCA (2) 1.1 0.0011 P8 GC+1d culture AATAAATTAG (2) 1.1 0.0011 P8 GC+1d culture CACTGAGGGG (2) 1.1 0.0011 P8 GC+1d culture CCCTTTCCTT (2) 1.1 0.0011 P8 GC+1d culture GCACTTCTTC (4) 1.1 0.0011 P8 GC+1d culture TCACATAGGA (4) 1.1 0.0011 P8 GC+SHH+1d culture CCCTTCTTCT (3) 12.9 0.0129 P8 GC+SHH+1d culture GCTTCTTCTG (4) 10.5 0.0105 P8 GC+SHH+1d culture CCGTTCTTCT (4) 4.7 0.0047 P8 GC+SHH+1d culture CAAACACCTC (2) 1.2 0.0012 P8 GC+SHH+1d culture CCCTTAATCT (3) 1.2 0.0012 P8 GC+SHH+1d culture CCCTTCTTGG (2) 1.2 0.0012 3T3 fibroblasts CACTGAGGGG (2) 10.5 0.0105 3T3 fibroblasts CCCTTAATCT (3) 7 0.007 3T3 fibroblasts GCTTCTTCTG (4) 7 0.007 E15 cortex CCCTTCTTCT (3) 158.3 0.1583 E15 cortex CCTCTCTGGA (2) 14.8 0.0148 E15 cortex CCCTTCTTTC (2) 9.9 0.0099 E15 cortex CCCACAAGCT (2) 4.9 0.0049 E15 cortex CCCTTTCCTT (2) 4.9 0.0049 E15 cortex GCTTCTTCTG (4) 4.9 0.0049 E15 cortex TCCTTCTTCT (2) 4.9 0.0049 P1 cortex CCCTTAATCT (3) 4.5 0.0045 P1 cortex CCCTTCTTCT (3) 4.5 0.0045 P1 cortex CCCTTCTTGG (2) 4.5 0.0045 P1 cortex CCCTTTCCTT (2) 4.5 0.0045 P1 cortex CCGTTCTTCT (4) 4.5 0.0045 P1 cortex GCTTCTTCTG (4) 4.5 0.0045 Hypothalamus CCCTTCTTCT (3) 21.7 0.0217 Hypothalamus GCCAGAAGGC (2) 7.2 0.0072 Hypothalamus GCTTCTTCTG (4) 7.2 0.0072 Hypothalamus GTGCTGAATA (2) 5.4 0.0054 Hypothalamus AAAGTAATCA (2) 3.6 0.0036 Hypothalamus CCTCTCTGGA (2) 3.6 0.0036 Hypothalamus GCCTTCTTCT (2) 3.6 0.0036 Hypothalamus GTGCTCTCTG (3) 3.6 0.0036 Hypothalamus CCCACAAGCT (2) 1.8 0.0018 Hypothalamus CCCTTTTTTT (4) 1.8 0.0018 Hypothalamus GCCTCTCTGG (3) 1.8 0.0018 E12.5 retina CCCTTCTTCT (3) 50.7 0.0507 E12.5 retina CCGTTCTTCT (4) 5.6 0.0056 E12.5 retina GCTTCTTCTG (4) 5.6 0.0056 E12.5 retina CCCTTAATCT (3) 3.8 0.0038 E12.5 retina CCTGCGTCTC (2) 1.9 0.0019 E14.5 retina CCCTTCTTCT (3) 43.7 0.0437 E14.5 retina GCTTCTTCTG (4) 5.5 0.0055 E14.5 retina GCACTTCTTC (4) 3.6 0.0036 E14.5 retina GCCAGAAGGC (2) 3.6 0.0036 E14.5 retina AATAAATTAG (2) 1.8 0.0018 E14.5 retina GCCTCTCTGG (3) 1.8 0.0018 E14.5 retina GCCTTCTTCT (2) 1.8 0.0018 E14.5 retina GTGCTGAATA (2) 1.8 0.0018 E14.5 retina GTTTCTTCCT (2) 1.8 0.0018 E14.5 retina TTTAATAAAA (8) 1.8 0.0018 E16.5 retina CCCTTCTTCT (3) 18.1 0.0181 E16.5 retina GCTTCTTCTG (4) 12.7 0.0127 E16.5 retina GCACTTCTTC (4) 3.6 0.0036 E16.5 retina GTGCTGAATA (2) 3.6 0.0036 E16.5 retina AAAGTAATCA (2) 1.8 0.0018 E16.5 retina CCCTTAATCT (3) 1.8 0.0018 E16.5 retina CCCTTTCCTT (2) 1.8 0.0018 E16.5 retina CCGTTCTTCT (4) 1.8 0.0018 E16.5 retina GCCAGAAGGC (2) 1.8 0.0018 E16.5 retina GCCTTCTTCT (2) 1.8 0.0018 E16.5 retina TCACATAGGA (4) 1.8 0.0018 E16.5 retina TCCTTCTTCT (2) 1.8 0.0018 E18.5 retina GCTTCTTCTG (4) 10.9 0.0109 E18.5 retina CCCTTCTTCT (3) 5.5 0.0055 E18.5 retina CCGTTCTTCT (4) 1.8 0.0018 E18.5 retina GCACTTCTTC (4) 1.8 0.0018 P0.5 retina CCCTTCTTCT (3) 11.8 0.0118 P0.5 retina GCTTCTTCTG (4) 3.9 0.0039 P0.5 retina CCCTTCTTGG (2) 2 0.002 P0.5 retina CCTCTCTGGA (2) 2 0.002 P0.5 retina GCCACAAGCT (4) 2 0.002 P2.5 retina CCCTTCTTCT (3) 15.8 0.0158 P2.5 retina GCTTCTTCTG (4) 14.1 0.0141 P2.5 retina GCCTCTCTGG (3) 5.3 0.0053 P2.5 retina CCCTTAATCT (3) 1.8 0.0018 P2.5 retina GCCACAAGCT (4) 1.8 0.0018 P2.5 retina GCCAGAAGGC (2) 1.8 0.0018 P4.5 retina CCCTTCTTCT (3) 11.9 0.0119 P4.5 retina GCTTCTTCTG (4) 11.9 0.0119 P4.5 retina AAAGTAATCA (2) 2 0.002 P4.5 retina CACTGAGGGG (2) 2 0.002 P4.5 retina CCCTTAATCT (3) 2 0.002 P4.5 retina CCGTTCTTCT (4) 2 0.002 P4.5 retina TTTAATAAAA (8) 2 0.002 P6.5 retina GCTTCTTCTG (4) 16.7 0.0167 P6.5 retina CCGTTCTTCT (4) 5 0.005 P6.5 retina CCCTTCTTCT (3) 3.3 0.0033 P6.5 retina CCCTTTTTTT (4) 1.7 0.0017 P6.5 retina GTTTCTTCCT (2) 1.7 0.0017 P10.5 crx- retina GCTTCTTCTG (4) 3.7 0.0037 P10.5 crx- retina CCGTTCTTCT (4) 1.9 0.0019 P10.5 crx- retina GCCTCTCTGG (3) 1.9 0.0019 P10.5 crx- retina TCACATAGGA (4) 1.9 0.0019 P10.5 crx+ retina CCCTTCTTCT (3) 19.2 0.0192 P10.5 crx+ retina GCTTCTTCTG (4) 13.5 0.0135 P10.5 crx+ retina CAAACACCTC (2) 3.8 0.0038 P10.5 crx+ retina CCGTTCTTCT (4) 3.8 0.0038 P10.5 crx+ retina CCTGCGTCTC (2) 3.8 0.0038 P10.5 crx+ retina CCCTTTCCTT (2) 1.9 0.0019 P10.5 crx+ retina TTTAATAAAA (8) 1.9 0.0019 Adult retinal CCCTTCTTCT (3) 5.6 0.0056 Adult retinal CCGTTCTTCT (4) 5.6 0.0056 Adult retinal CCCTTCTTTC (2) 1.9 0.0019 Adult retinal GCTTCTTCTG (4) 1.9 0.0019 Adult retinal TCCTTCTTCT (2) 1.9 0.0019 Adult retinal TTTAATAAAA (8) 1.9 0.0019 ONL GCTTCTTCTG (4) 7.7 0.0077 ONL CCGTTCTTCT (4) 3.8 0.0038 ONL GTGCTGAATA (2) 3.8 0.0038