Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.197387
1700129O19Rik
RIKEN cDNA 1700129O19 gene
13
78643
Mm.197387
Bicd2
bicaudal D homolog 2 (Drosophila)
13
76895
Mm.197387
D10Mgi11
DNA Segment, Chr 10, Mouse Genome Informatics 11
10
103083
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTGATGGCG
(
3
)
4.9
0.0049
P8 Cb GC
CAGAGGAAGG
(
4
)
1.6
0.0016
P8 Cb GC
GGGAAAAAAA
(
5
)
1.6
0.0016
P8 Cb GC
GTGATTTGGA
(
3
)
1.6
0.0016
Cb medulloblastoma
GGGAAAAAAA
(
5
)
92.5
0.0925
Cb medulloblastoma
GCTGATGGCG
(
3
)
6.9
0.0069
Cb medulloblastoma
CAGAGGAAGG
(
4
)
2.3
0.0023
Cb medulloblastoma
TTTGCCACCA
(
4
)
2.3
0.0023
P8 GC+1d culture
GCTGATGGCG
(
3
)
8
0.008
P8 GC+1d culture
GGGAAAAAAA
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
GCTGATGGCG
(
3
)
10.5
0.0105
P8 GC+SHH+1d culture
CGAGTGGGGA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GGGAAAAAAA
(
5
)
1.2
0.0012
3T3 fibroblasts
CAGAGGAAGG
(
4
)
10.5
0.0105
3T3 fibroblasts
GCTGATGGCG
(
3
)
10.5
0.0105
E15 cortex
GCTGATGGCG
(
3
)
19.8
0.0198
P1 cortex
CGAGTGGGGA
(
3
)
9.1
0.0091
P1 cortex
CATATGACTT
(
3
)
4.5
0.0045
P1 cortex
GCTGATGGCG
(
3
)
4.5
0.0045
P1 cortex
GGGAAAAAAA
(
5
)
4.5
0.0045
Hypothalamus
GGGAAAAAAA
(
5
)
41.7
0.0417
Hypothalamus
GCTGATGGCG
(
3
)
5.4
0.0054
Hypothalamus
CAGAGGAAGG
(
4
)
1.8
0.0018
Hypothalamus
CATATGACTT
(
3
)
1.8
0.0018
Hypothalamus
GAAATGAAGG
(
4
)
1.8
0.0018
E12.5 retina
GCTGATGGCG
(
3
)
5.6
0.0056
E14.5 retina
GCTGATGGCG
(
3
)
3.6
0.0036
E14.5 retina
CAGAGGAAGG
(
4
)
1.8
0.0018
E14.5 retina
GGGAAAAAAA
(
5
)
1.8
0.0018
E16.5 retina
GCTGATGGCG
(
3
)
10.9
0.0109
E16.5 retina
GGGAAAAAAA
(
5
)
3.6
0.0036
E16.5 retina
CAGAGGAAGG
(
4
)
1.8
0.0018
E16.5 retina
GAAATGAAGG
(
4
)
1.8
0.0018
E16.5 retina
GTGATTTGGA
(
3
)
1.8
0.0018
E18.5 retina
GCTGATGGCG
(
3
)
3.6
0.0036
E18.5 retina
GTGATTTGGA
(
3
)
3.6
0.0036
E18.5 retina
GGGAAAAAAA
(
5
)
1.8
0.0018
P0.5 retina
GCTGATGGCG
(
3
)
3.9
0.0039
P0.5 retina
GGGAAAAAAA
(
5
)
3.9
0.0039
P0.5 retina
CAGAGGAAGG
(
4
)
2
0.002
P0.5 retina
GTGATTTGGA
(
3
)
2
0.002
P2.5 retina
GCTGATGGCG
(
3
)
10.6
0.0106
P2.5 retina
GGGAAAAAAA
(
5
)
7
0.007
P2.5 retina
CAGAGGAAGG
(
4
)
1.8
0.0018
P2.5 retina
GAAATGAAGG
(
4
)
1.8
0.0018
P2.5 retina
GTGATTTGGA
(
3
)
1.8
0.0018
P4.5 retina
GCTGATGGCG
(
3
)
9.9
0.0099
P4.5 retina
GGGAAAAAAA
(
5
)
9.9
0.0099
P4.5 retina
GTGATTTGGA
(
3
)
2
0.002
P6.5 retina
GGGAAAAAAA
(
5
)
20
0.02
P6.5 retina
GCTGATGGCG
(
3
)
8.3
0.0083
P6.5 retina
CAGAGGAAGG
(
4
)
1.7
0.0017
P6.5 retina
GTGATTTGGA
(
3
)
1.7
0.0017
P6.5 retina
TTTGCCACCA
(
4
)
1.7
0.0017
P10.5 crx- retina
GGGAAAAAAA
(
5
)
11.1
0.0111
P10.5 crx- retina
GCTGATGGCG
(
3
)
3.7
0.0037
P10.5 crx- retina
CATATGACTT
(
3
)
1.9
0.0019
P10.5 crx- retina
GAAATGAAGG
(
4
)
1.9
0.0019
P10.5 crx+ retina
GGGAAAAAAA
(
5
)
23.1
0.0231
P10.5 crx+ retina
GCTGATGGCG
(
3
)
17.3
0.0173
P10.5 crx+ retina
GTGATTTGGA
(
3
)
5.8
0.0058
P10.5 crx+ retina
CGAGTGGGGA
(
3
)
1.9
0.0019
P10.5 crx+ retina
TTTGCCACCA
(
4
)
1.9
0.0019
Adult retinal
GGGAAAAAAA
(
5
)
35.2
0.0352
Adult retinal
GCTGATGGCG
(
3
)
3.7
0.0037
ONL
GGGAAAAAAA
(
5
)
30.6
0.0306
