Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.201322	D2Ertd63e	DNA segment, Chr 2, ERATO Doi 63, expressed	2	2 101.0 cM	51845
Mm.201322	Dpm1	dolichol-phosphate (beta-D) mannosyltransferase 1	2		13480
Mm.201322	Adnp	activity-dependent neuroprotective protein	2		11538
Gene Ontology	DNA binding | neuropeptide hormone activity | neuropeptide signaling pathway | nucleic acid binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | zinc ion binding
Human Homolog	ADNP[activity-dependent neuroprotector]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAATGAAA (5) 3.3 0.0033 P8 Cb GC AATGCACACA (5) 1.6 0.0016 P8 Cb GC CAAGAATTGA (3) 1.6 0.0016 P8 Cb GC GTCTGTCTTG (3) 1.6 0.0016 Cb medulloblastoma TGAAATGAAA (5) 4.6 0.0046 Cb medulloblastoma GTCTGTCTTG (3) 2.3 0.0023 Cb medulloblastoma TATCTTCTGA (3) 2.3 0.0023 P8 GC+1d culture CAAGAATTGA (3) 4.6 0.0046 P8 GC+1d culture AATGCACACA (5) 1.1 0.0011 P8 GC+1d culture TATCTTCTGA (3) 1.1 0.0011 P8 GC+1d culture TTATTTTAGC (3) 1.1 0.0011 P8 GC+SHH+1d culture CAAGAATTGA (3) 7 0.007 P8 GC+SHH+1d culture TGAAATGAAA (5) 3.5 0.0035 P8 GC+SHH+1d culture AATGCACACA (5) 1.2 0.0012 P8 GC+SHH+1d culture CTCCAAACTC (3) 1.2 0.0012 P8 GC+SHH+1d culture TTATTTTAGC (3) 1.2 0.0012 E15 cortex CTCCAAACTC (3) 9.9 0.0099 P1 cortex CAAGAATTGA (3) 9.1 0.0091 Hypothalamus CAAGAATTGA (3) 1.8 0.0018 Hypothalamus TGAAATGAAA (5) 1.8 0.0018 E12.5 retina CAAGAATTGA (3) 7.5 0.0075 E14.5 retina TGAAATGAAA (5) 1.8 0.0018 E16.5 retina GTCTGTCTTG (3) 5.4 0.0054 E16.5 retina TGAAATGAAA (5) 3.6 0.0036 E16.5 retina CAAGAATTGA (3) 1.8 0.0018 E18.5 retina TTATTTTAGC (3) 3.6 0.0036 E18.5 retina AATGCACACA (5) 1.8 0.0018 E18.5 retina TGAAATGAAA (5) 1.8 0.0018 P0.5 retina CAAGAATTGA (3) 3.9 0.0039 P0.5 retina AATGCACACA (5) 2 0.002 P0.5 retina TGAAATGAAA (5) 2 0.002 P2.5 retina TGAAATGAAA (5) 7 0.007 P2.5 retina CAAGAATTGA (3) 3.5 0.0035 P2.5 retina TTATTTTAGC (3) 3.5 0.0035 P4.5 retina CAAGAATTGA (3) 4 0.004 P4.5 retina TGAAATGAAA (5) 2 0.002 P4.5 retina TTATTTTAGC (3) 2 0.002 P6.5 retina CAAGAATTGA (3) 6.7 0.0067 P6.5 retina TGAAATGAAA (5) 3.3 0.0033 P6.5 retina AATGCACACA (5) 1.7 0.0017 P6.5 retina TATCTTCTGA (3) 1.7 0.0017 P10.5 crx- retina CAAGAATTGA (3) 1.9 0.0019 P10.5 crx- retina TGAAATGAAA (5) 1.9 0.0019 P10.5 crx+ retina AATGCACACA (5) 1.9 0.0019 P10.5 crx+ retina CAAGAATTGA (3) 1.9 0.0019 P10.5 crx+ retina TGAAATGAAA (5) 1.9 0.0019 Adult retinal CAAGAATTGA (3) 7.4 0.0074 Adult retinal TGAAATGAAA (5) 1.9 0.0019 ONL AATGCACACA (5) 7.7 0.0077 ONL CAAGAATTGA (3) 5.7 0.0057