Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.201706
R74903
expressed sequence R74903
16
98045
Mm.201706
1810013L24Rik
RIKEN cDNA 1810013L24 gene
16
69053
Mm.201706
3010002C02Rik
RIKEN cDNA 3010002C02 gene
16
72398
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 5 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AACCTTTCTT
(
3
)
1.6
0.0016
P8 Cb GC
AAGTGTTGAG
(
3
)
1.6
0.0016
P8 Cb GC
CAAGTAATAC
(
3
)
1.6
0.0016
P8 Cb GC
CCGTGTTCTG
(
3
)
1.6
0.0016
P8 Cb GC
TAACAGTGGA
(
3
)
1.6
0.0016
P8 Cb GC
TACCTTTGTA
(
3
)
1.6
0.0016
Cb medulloblastoma
TAACAGTGGA
(
3
)
4.6
0.0046
Cb medulloblastoma
TACCTTTGTA
(
3
)
2.3
0.0023
P8 GC+1d culture
TACCTTTGTA
(
3
)
5.7
0.0057
P8 GC+1d culture
TAACAGTGGA
(
3
)
2.3
0.0023
P8 GC+1d culture
CAAGTAATAC
(
3
)
1.1
0.0011
P8 GC+1d culture
CCGTGTTCTG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TAACAGTGGA
(
3
)
4.7
0.0047
P8 GC+SHH+1d culture
AACCTTTCTT
(
3
)
1.2
0.0012
P1 cortex
AACCTTTCTT
(
3
)
4.5
0.0045
P1 cortex
TTAAAATAAC
(
3
)
4.5
0.0045
Hypothalamus
CAAGTAATAC
(
3
)
1.8
0.0018
Hypothalamus
TACCTTTGTA
(
3
)
1.8
0.0018
E12.5 retina
TACCTTTGTA
(
3
)
1.9
0.0019
E14.5 retina
TACCTTTGTA
(
3
)
1.8
0.0018
E16.5 retina
AGAATTAACC
(
4
)
3.6
0.0036
E16.5 retina
AACCTTTCTT
(
3
)
1.8
0.0018
E16.5 retina
TACCTTTGTA
(
3
)
1.8
0.0018
E18.5 retina
CAAGTAATAC
(
3
)
1.8
0.0018
P0.5 retina
AAGTGTTGAG
(
3
)
2
0.002
P0.5 retina
TACCTTTGTA
(
3
)
2
0.002
P2.5 retina
CCGTGTTCTG
(
3
)
3.5
0.0035
P2.5 retina
TTAAAATAAC
(
3
)
3.5
0.0035
P2.5 retina
AGAATTAACC
(
4
)
1.8
0.0018
P2.5 retina
TACCTTTGTA
(
3
)
1.8
0.0018
P4.5 retina
TACCTTTGTA
(
3
)
2
0.002
P6.5 retina
TACCTTTGTA
(
3
)
8.3
0.0083
P6.5 retina
AGAATTAACC
(
4
)
1.7
0.0017
P6.5 retina
CAAGTAATAC
(
3
)
1.7
0.0017
P6.5 retina
TTAAAATAAC
(
3
)
1.7
0.0017
P10.5 crx- retina
TACCTTTGTA
(
3
)
1.9
0.0019
P10.5 crx+ retina
CCGTGTTCTG
(
3
)
1.9
0.0019
Adult retinal
TACCTTTGTA
(
3
)
3.7
0.0037
Adult retinal
AAGTGTTGAG
(
3
)
1.9
0.0019
Adult retinal
CCGTGTTCTG
(
3
)
1.9
0.0019
ONL
AGAATTAACC
(
4
)
1.9
0.0019
ONL
TACCTTTGTA
(
3
)
1.9
0.0019
