Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.205421
A130078K24Rik
RIKEN cDNA A130078K24 gene
14
399616
Mm.205421
Fndc3
fibronectin type III domain containing 3
14
14 42.0 cM
319448
Human Homolog
FNDC3[fibronectin type III domain containing 3]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCTGCGTCCT
(
3
)
16.3
0.0163
P8 Cb GC
GAAAATAAAA
(
2
)
11.4
0.0114
P8 Cb GC
TGAAAGAACA
(
4
)
1.6
0.0016
Cb medulloblastoma
TCTGCGTCCT
(
3
)
6.9
0.0069
Cb medulloblastoma
GAAAATAAAA
(
2
)
4.6
0.0046
Cb medulloblastoma
TAACACTGAC
(
4
)
2.3
0.0023
Cb medulloblastoma
TGAAAGAACA
(
4
)
2.3
0.0023
P8 GC+1d culture
TCTGCGTCCT
(
3
)
9.1
0.0091
P8 GC+1d culture
GAAAATAAAA
(
2
)
2.3
0.0023
P8 GC+1d culture
TAACACTGAC
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
TCTGCGTCCT
(
3
)
12.9
0.0129
P8 GC+SHH+1d culture
GAAAATAAAA
(
2
)
9.4
0.0094
P8 GC+SHH+1d culture
TAACACTGAC
(
4
)
5.9
0.0059
3T3 fibroblasts
TCTGCGTCCT
(
3
)
7
0.007
3T3 fibroblasts
TGAAAGAACA
(
4
)
3.5
0.0035
P1 cortex
GAAAATAAAA
(
2
)
4.5
0.0045
Hypothalamus
TCTGCGTCCT
(
3
)
10.9
0.0109
Hypothalamus
GAAAATAAAA
(
2
)
5.4
0.0054
Hypothalamus
TAACACTGAC
(
4
)
1.8
0.0018
E12.5 retina
TCTGCGTCCT
(
3
)
18.8
0.0188
E12.5 retina
GAAAATAAAA
(
2
)
9.4
0.0094
E12.5 retina
TAACACTGAC
(
4
)
7.5
0.0075
E14.5 retina
TCTGCGTCCT
(
3
)
25.5
0.0255
E14.5 retina
GAAAATAAAA
(
2
)
3.6
0.0036
E16.5 retina
TCTGCGTCCT
(
3
)
16.3
0.0163
E16.5 retina
GAAAATAAAA
(
2
)
3.6
0.0036
E16.5 retina
TAACACTGAC
(
4
)
1.8
0.0018
E18.5 retina
GAAAATAAAA
(
2
)
12.7
0.0127
E18.5 retina
TCTGCGTCCT
(
3
)
12.7
0.0127
E18.5 retina
TAACACTGAC
(
4
)
1.8
0.0018
P0.5 retina
TCTGCGTCCT
(
3
)
17.7
0.0177
P0.5 retina
GAAAATAAAA
(
2
)
2
0.002
P0.5 retina
TAACACTGAC
(
4
)
2
0.002
P2.5 retina
TAACACTGAC
(
4
)
12.3
0.0123
P2.5 retina
TCTGCGTCCT
(
3
)
8.8
0.0088
P2.5 retina
GAAAATAAAA
(
2
)
7
0.007
P4.5 retina
TAACACTGAC
(
4
)
17.8
0.0178
P4.5 retina
GAAAATAAAA
(
2
)
11.9
0.0119
P4.5 retina
TCTGCGTCCT
(
3
)
11.9
0.0119
P6.5 retina
TCTGCGTCCT
(
3
)
11.7
0.0117
P6.5 retina
GAAAATAAAA
(
2
)
5
0.005
P10.5 crx- retina
TCTGCGTCCT
(
3
)
20.4
0.0204
P10.5 crx- retina
TAACACTGAC
(
4
)
5.6
0.0056
P10.5 crx- retina
TGAAAGAACA
(
4
)
1.9
0.0019
P10.5 crx+ retina
TCTGCGTCCT
(
3
)
23.1
0.0231
P10.5 crx+ retina
TAACACTGAC
(
4
)
7.7
0.0077
Adult retinal
TAACACTGAC
(
4
)
3.7
0.0037
Adult retinal
GAAAATAAAA
(
2
)
1.9
0.0019
Adult retinal
TCTGCGTCCT
(
3
)
1.9
0.0019
Adult retinal
TGAAAGAACA
(
4
)
1.9
0.0019
ONL
GAAAATAAAA
(
2
)
5.7
0.0057
ONL
TCTGCGTCCT
(
3
)
3.8
0.0038
