Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21162	Grim19	genes associated with retinoid-IFN-induced mortality 19	8		67184
Gene Ontology	apoptosis | ATP binding | integral to membrane | mitochondrion | nucleus | oxidoreductase activity
Human Homolog	GRIM19[cell death-regulatory protein GRIM19]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGATGTGC (2) 16.3 0.0163 P8 Cb GC AATTAAGGGG (2) 3.3 0.0033 P8 Cb GC CCCCCGCCAG 1.6 0.0016 Cb medulloblastoma AAGGATGTGC (2) 37 0.037 Cb medulloblastoma GGTGCCCCCC 2.3 0.0023 P8 GC+1d culture AAGGATGTGC (2) 17.1 0.0171 P8 GC+1d culture AATTAAGGGG (2) 1.1 0.0011 P8 GC+SHH+1d culture AAGGATGTGC (2) 15.2 0.0152 P8 GC+SHH+1d culture AATTAAGGGG (2) 4.7 0.0047 3T3 fibroblasts AAGGATGTGC (2) 24.5 0.0245 3T3 fibroblasts CCGCTCTTCC 3.5 0.0035 E15 cortex AAGGATGTGC (2) 9.9 0.0099 P1 cortex AAGGATGTGC (2) 4.5 0.0045 P1 cortex CCGCTCTTCC 4.5 0.0045 Hypothalamus AAGGATGTGC (2) 14.5 0.0145 Hypothalamus TTTGCTGTGG 1.8 0.0018 E12.5 retina AAGGATGTGC (2) 9.4 0.0094 E14.5 retina AAGGATGTGC (2) 12.8 0.0128 E14.5 retina AGGGCGATCC 3.6 0.0036 E14.5 retina AATTAAGGGG (2) 1.8 0.0018 E16.5 retina AAGGATGTGC (2) 14.5 0.0145 E16.5 retina AATTAAGGGG (2) 1.8 0.0018 E18.5 retina AAGGATGTGC (2) 7.3 0.0073 E18.5 retina GGTGCCCCCC 1.8 0.0018 P0.5 retina AAGGATGTGC (2) 9.8 0.0098 P0.5 retina AGGGCGATCC 2 0.002 P2.5 retina AAGGATGTGC (2) 3.5 0.0035 P2.5 retina AATTAAGGGG (2) 3.5 0.0035 P2.5 retina CCCCCGCCAG 1.8 0.0018 P4.5 retina AAGGATGTGC (2) 4 0.004 P4.5 retina AGGGCGATCC 2 0.002 P6.5 retina AAGGATGTGC (2) 11.7 0.0117 P6.5 retina AATTAAGGGG (2) 1.7 0.0017 P6.5 retina GGTGCCCCCC 1.7 0.0017 P10.5 crx- retina AAGGATGTGC (2) 61.3 0.0613 P10.5 crx- retina TTTGCTGTGG 5.6 0.0056 P10.5 crx- retina AATTAAGGGG (2) 1.9 0.0019 P10.5 crx+ retina AAGGATGTGC (2) 13.5 0.0135 Adult retinal AAGGATGTGC (2) 20.4 0.0204 Adult retinal AGGGCGATCC 1.9 0.0019 Adult retinal CCGCTCTTCC 1.9 0.0019 ONL AAGGATGTGC (2) 7.7 0.0077