Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.212227	AU018877	expressed sequence AU018877	13		105276
Mm.212227	Cdkal1	CDK5 regulatory subunit associated protein 1-like 1	13		68916
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	CDKAL1[CDK5 regulatory subunit associated protein 1-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGCTGCTCA (3) 9.8 0.0098 P8 Cb GC GCTGGACAGC (4) 3.3 0.0033 P8 Cb GC TCTTTCTCAT (2) 3.3 0.0033 P8 Cb GC GAATCTTCAC (2) 1.6 0.0016 Cb medulloblastoma GGGCTGCTCA (3) 6.9 0.0069 Cb medulloblastoma GAATCTTCAC (2) 2.3 0.0023 Cb medulloblastoma TCTGTTTCTA (2) 2.3 0.0023 P8 GC+1d culture GGGCTGCTCA (3) 9.1 0.0091 P8 GC+1d culture GCTGGACAGC (4) 2.3 0.0023 P8 GC+1d culture TATGATAAAA (3) 1.1 0.0011 P8 GC+1d culture TCTGTTTCTA (2) 1.1 0.0011 P8 GC+SHH+1d culture GGGCTGCTCA (3) 11.7 0.0117 P8 GC+SHH+1d culture TTACATTTAT (2) 1.2 0.0012 3T3 fibroblasts GGGCTGCTCA (3) 7 0.007 E15 cortex GGGCTGCTCA (3) 24.7 0.0247 P1 cortex GGGCTGCTCA (3) 4.5 0.0045 Hypothalamus TAGCGGGGAG (3) 5.4 0.0054 Hypothalamus GGGCTGCTCA (3) 1.8 0.0018 E12.5 retina GGGCTGCTCA (3) 20.7 0.0207 E12.5 retina TATGATAAAA (3) 3.8 0.0038 E12.5 retina TCTGTTTCTA (2) 1.9 0.0019 E12.5 retina TTACATTTAT (2) 1.9 0.0019 E14.5 retina GGGCTGCTCA (3) 12.8 0.0128 E14.5 retina TAGCGGGGAG (3) 5.5 0.0055 E14.5 retina TCTGTTTCTA (2) 1.8 0.0018 E14.5 retina TTACATTTAT (2) 1.8 0.0018 E16.5 retina GGGCTGCTCA (3) 9.1 0.0091 E16.5 retina TCTTTCTCAT (2) 1.8 0.0018 E16.5 retina TTACATTTAT (2) 1.8 0.0018 E18.5 retina TAGCGGGGAG (3) 3.6 0.0036 E18.5 retina TATGATAAAA (3) 3.6 0.0036 E18.5 retina GGGCTGCTCA (3) 1.8 0.0018 P0.5 retina GGGCTGCTCA (3) 11.8 0.0118 P0.5 retina GCTGGACAGC (4) 2 0.002 P2.5 retina GGGCTGCTCA (3) 8.8 0.0088 P2.5 retina TTACATTTAT (2) 3.5 0.0035 P4.5 retina TATGATAAAA (3) 5.9 0.0059 P4.5 retina GGGCTGCTCA (3) 2 0.002 P4.5 retina TCTGTTTCTA (2) 2 0.002 P6.5 retina GGGCTGCTCA (3) 5 0.005 P6.5 retina TAGCGGGGAG (3) 1.7 0.0017 P10.5 crx- retina GGGCTGCTCA (3) 5.6 0.0056 P10.5 crx- retina TCTGTTTCTA (2) 1.9 0.0019 P10.5 crx+ retina GGGCTGCTCA (3) 5.8 0.0058 P10.5 crx+ retina GAATCTTCAC (2) 1.9 0.0019 P10.5 crx+ retina TAGCGGGGAG (3) 1.9 0.0019 Adult retinal GAATCTTCAC (2) 1.9 0.0019 Adult retinal GGGCTGCTCA (3) 1.9 0.0019