Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.218889	1110001C20Rik	RIKEN cDNA 1110001C20 gene	4		242291
Human Homolog	FLJ20421[hypothetical protein FLJ20421]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTCAATTAAC 4.9 0.0049 P8 Cb GC TCTGAAAAGG (2) 4.9 0.0049 P8 Cb GC TCAACGCAGA 3.3 0.0033 P8 Cb GC TCTGAAAAAA (2) 3.3 0.0033 P8 Cb GC ATCCAATTCT 1.6 0.0016 P8 Cb GC CTCTTATATG 1.6 0.0016 Cb medulloblastoma TCTGAAAAAA (2) 16.2 0.0162 Cb medulloblastoma TCTGAAAAGG (2) 11.6 0.0116 Cb medulloblastoma GTCAATTAAC 2.3 0.0023 Cb medulloblastoma TAAATTGTTC 2.3 0.0023 Cb medulloblastoma TGGCTTTGAT (3) 2.3 0.0023 P8 GC+1d culture TCTGAAAAGG (2) 8 0.008 P8 GC+1d culture TCTGAAAAAA (2) 4.6 0.0046 P8 GC+1d culture ATGTATATAA 2.3 0.0023 P8 GC+1d culture ATCCAATTCT 1.1 0.0011 P8 GC+1d culture TAAATTGTTC 1.1 0.0011 P8 GC+1d culture TGGCTTTGAT (3) 1.1 0.0011 P8 GC+SHH+1d culture TCTGAAAAGG (2) 8.2 0.0082 P8 GC+SHH+1d culture TCTGAAAAAA (2) 4.7 0.0047 P8 GC+SHH+1d culture TGGCTTTGAT (3) 3.5 0.0035 P8 GC+SHH+1d culture TAAATTGTTC 2.3 0.0023 P8 GC+SHH+1d culture ATCCAATTCT 1.2 0.0012 P8 GC+SHH+1d culture CTCTTATATG 1.2 0.0012 3T3 fibroblasts TCAACGCAGA 7 0.007 3T3 fibroblasts GTCAATTAAC 3.5 0.0035 3T3 fibroblasts TCTGAAAAGG (2) 3.5 0.0035 3T3 fibroblasts TGGCTTTGAT (3) 3.5 0.0035 E15 cortex GTCAATTAAC 4.9 0.0049 E15 cortex TCTGAAAAAA (2) 4.9 0.0049 E15 cortex TCTGAAAAGG (2) 4.9 0.0049 P1 cortex TCTGAAAAGG (2) 18.2 0.0182 P1 cortex CTCTTATATG 4.5 0.0045 Hypothalamus TCTGAAAAGG (2) 7.2 0.0072 Hypothalamus TCTGAAAAAA (2) 5.4 0.0054 Hypothalamus TAAATGTTCT (2) 3.6 0.0036 Hypothalamus TAAATTGTTC 1.8 0.0018 Hypothalamus TGGCTTTGAT (3) 1.8 0.0018 Hypothalamus TTAACTTAGT 1.8 0.0018 E12.5 retina TCTGAAAAAA (2) 5.6 0.0056 E12.5 retina TCTGAAAAGG (2) 5.6 0.0056 E12.5 retina TGGCTTTGAT (3) 3.8 0.0038 E12.5 retina CGTGCACCGT 1.9 0.0019 E12.5 retina TAAATGTTCT (2) 1.9 0.0019 E14.5 retina TCTGAAAAGG (2) 5.5 0.0055 E14.5 retina TCTGAAAAAA (2) 3.6 0.0036 E14.5 retina CGTGCACCGT 1.8 0.0018 E16.5 retina TCTGAAAAAA (2) 5.4 0.0054 E16.5 retina TCTGAAAAGG (2) 3.6 0.0036 E16.5 retina TTAACTTAGT 1.8 0.0018 E18.5 retina TCTGAAAAAA (2) 9.1 0.0091 E18.5 retina TCTGAAAAGG (2) 5.5 0.0055 E18.5 retina TGGCTTTGAT (3) 3.6 0.0036 P0.5 retina TCTGAAAAGG (2) 3.9 0.0039 P0.5 retina GATGGAGATG (2) 2 0.002 P0.5 retina TGGCTTTGAT (3) 2 0.002 P2.5 retina TCTGAAAAGG (2) 12.3 0.0123 P2.5 retina TCTGAAAAAA (2) 3.5 0.0035 P2.5 retina CTCTTATATG 1.8 0.0018 P2.5 retina TAAATTGTTC 1.8 0.0018 P2.5 retina TGGCTTTGAT (3) 1.8 0.0018 P4.5 retina TCTGAAAAGG (2) 5.9 0.0059 P4.5 retina GATGGAGATG (2) 2 0.002 P4.5 retina TAAATGTTCT (2) 2 0.002 P4.5 retina TAAATTGTTC 2 0.002 P4.5 retina TTAACTTAGT 2 0.002 P6.5 retina TCTGAAAAGG (2) 5 0.005 P6.5 retina TGGCTTTGAT (3) 3.3 0.0033 P6.5 retina CGTGCACCGT 1.7 0.0017 P6.5 retina GATGGAGATG (2) 1.7 0.0017 P6.5 retina GTCAATTAAC 1.7 0.0017 P6.5 retina TAAATTGTTC 1.7 0.0017 P10.5 crx- retina TCTGAAAAGG (2) 7.4 0.0074 P10.5 crx- retina TCTGAAAAAA (2) 5.6 0.0056 P10.5 crx- retina ATGTATATAA 3.7 0.0037 P10.5 crx- retina GTCAATTAAC 1.9 0.0019 P10.5 crx+ retina TCTGAAAAGG (2) 3.8 0.0038 P10.5 crx+ retina TCTGAAAAAA (2) 1.9 0.0019 Adult retinal GTCAATTAAC 1.9 0.0019 Adult retinal TCAACGCAGA 1.9 0.0019 Adult retinal TCTGAAAAAA (2) 1.9 0.0019 Adult retinal TGGCTTTGAT (3) 1.9 0.0019 ONL ATCCAATTCT 1.9 0.0019 ONL TCTGAAAAGG (2) 1.9 0.0019