Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.219648	D18Ertd693e	DNA segment, Chr 18, ERATO Doi 693, expressed	18	18 3.0 cM	52519
Mm.219648	Thoc1	THO complex 1	18		225160
Gene Ontology	apoptosis | DNA binding | mRNA processing | mRNA-nucleus export | nuclear mRNA splicing, via spliceosome | nucleus | protein binding | regulation of apoptosis | RNA binding | signal transduction | structural molecule activity | transport
Human Homolog	THOC1[THO complex 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTTTACAAT (2) 4.9 0.0049 P8 Cb GC CAGGAAACTA (2) 1.6 0.0016 Cb medulloblastoma ACTTTACAAT (2) 4.6 0.0046 Cb medulloblastoma CAACAACTGA (2) 2.3 0.0023 P8 GC+1d culture ACTTTACAAT (2) 3.4 0.0034 P8 GC+1d culture CAACAACTGA (2) 2.3 0.0023 P8 GC+1d culture CAGGAAACTA (2) 2.3 0.0023 P8 GC+1d culture ATTGAAAAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture ACTTTACAAT (2) 5.9 0.0059 P8 GC+SHH+1d culture CAACAACTGA (2) 1.2 0.0012 Hypothalamus CAGGAAACTA (2) 5.4 0.0054 Hypothalamus CAACAACTGA (2) 3.6 0.0036 Hypothalamus ACTTTACAAT (2) 1.8 0.0018 E12.5 retina ACTTTACAAT (2) 5.6 0.0056 E12.5 retina CAACAACTGA (2) 3.8 0.0038 E14.5 retina ACTTTACAAT (2) 5.5 0.0055 E14.5 retina CAACAACTGA (2) 3.6 0.0036 E14.5 retina CAGGAAACTA (2) 1.8 0.0018 E16.5 retina ACTTTACAAT (2) 5.4 0.0054 E16.5 retina CAACAACTGA (2) 5.4 0.0054 E18.5 retina ATTGAAAAAA (2) 1.8 0.0018 E18.5 retina CAACAACTGA (2) 1.8 0.0018 P0.5 retina ACTTTACAAT (2) 5.9 0.0059 P0.5 retina ATTGAAAAAA (2) 2 0.002 P0.5 retina CAACAACTGA (2) 2 0.002 P2.5 retina CAACAACTGA (2) 3.5 0.0035 P4.5 retina ACTTTACAAT (2) 5.9 0.0059 P6.5 retina CAACAACTGA (2) 3.3 0.0033 P6.5 retina ACTTTACAAT (2) 1.7 0.0017 P6.5 retina CAGGAAACTA (2) 1.7 0.0017 P10.5 crx- retina ACTTTACAAT (2) 5.6 0.0056 P10.5 crx- retina CAACAACTGA (2) 5.6 0.0056 P10.5 crx- retina ATTGAAAAAA (2) 1.9 0.0019 P10.5 crx+ retina ACTTTACAAT (2) 5.8 0.0058 P10.5 crx+ retina CAACAACTGA (2) 3.8 0.0038 P10.5 crx+ retina CAGGAAACTA (2) 1.9 0.0019 Adult retinal ACTTTACAAT (2) 1.9 0.0019 Adult retinal CAACAACTGA (2) 1.9 0.0019 ONL ACTTTACAAT (2) 1.9 0.0019