Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.227281
1110055L24Rik
RIKEN cDNA 1110055L24 gene
2
66205
Mm.227281
5730458M16Rik
RIKEN cDNA 5730458M16 gene
2
66638
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TATTAAATGT
(
2
)
4.9
0.0049
P8 Cb GC
AAAGCTGCAA
(
2
)
1.6
0.0016
P8 Cb GC
TATTTAATGT
(
2
)
1.6
0.0016
Cb medulloblastoma
TATTAAATGT
(
2
)
25.4
0.0254
Cb medulloblastoma
AAAGCTGCAA
(
2
)
9.2
0.0092
P8 GC+1d culture
TATTAAATGT
(
2
)
8
0.008
P8 GC+1d culture
AAAGCTGCAA
(
2
)
5.7
0.0057
P8 GC+SHH+1d culture
TATTAAATGT
(
2
)
4.7
0.0047
P8 GC+SHH+1d culture
AAAGCTGCAA
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
TAAAATTAAA
(
2
)
1.2
0.0012
3T3 fibroblasts
AAAGCTGCAA
(
2
)
3.5
0.0035
E15 cortex
TATTAAATGT
(
2
)
4.9
0.0049
P1 cortex
TATTTAATGT
(
2
)
4.5
0.0045
Hypothalamus
TATTAAATGT
(
2
)
30.8
0.0308
Hypothalamus
AAAGCTGCAA
(
2
)
3.6
0.0036
E12.5 retina
AAAGCTGCAA
(
2
)
1.9
0.0019
E14.5 retina
TATTTAATGT
(
2
)
1.8
0.0018
E16.5 retina
TATTAAATGT
(
2
)
5.4
0.0054
E16.5 retina
AAAGCTGCAA
(
2
)
1.8
0.0018
E16.5 retina
GTAAGCATAC
(
3
)
1.8
0.0018
E18.5 retina
TATTAAATGT
(
2
)
14.6
0.0146
E18.5 retina
GTAAGCATAC
(
3
)
1.8
0.0018
P0.5 retina
TATTAAATGT
(
2
)
5.9
0.0059
P0.5 retina
AAATTTGCAA
(
2
)
3.9
0.0039
P2.5 retina
TATTAAATGT
(
2
)
5.3
0.0053
P2.5 retina
AAAGCTGCAA
(
2
)
3.5
0.0035
P2.5 retina
TAAAATTAAA
(
2
)
1.8
0.0018
P4.5 retina
GTAAGCATAC
(
3
)
4
0.004
P4.5 retina
TATTAAATGT
(
2
)
4
0.004
P4.5 retina
TATTTAATGT
(
2
)
2
0.002
P6.5 retina
TATTAAATGT
(
2
)
8.3
0.0083
P6.5 retina
AAAGCTGCAA
(
2
)
1.7
0.0017
P10.5 crx- retina
TATTAAATGT
(
2
)
3.7
0.0037
P10.5 crx+ retina
AAAGCTGCAA
(
2
)
5.8
0.0058
P10.5 crx+ retina
TATTAAATGT
(
2
)
3.8
0.0038
P10.5 crx+ retina
TAAAATTAAA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TATTTAATGT
(
2
)
1.9
0.0019
Adult retinal
AAATTTGCAA
(
2
)
1.9
0.0019
Adult retinal
GTAAGCATAC
(
3
)
1.9
0.0019
Adult retinal
TATTAAATGT
(
2
)
1.9
0.0019
ONL
TATTAAATGT
(
2
)
3.8
0.0038
ONL
TAAAATTAAA
(
2
)
1.9
0.0019
