Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.227464
2900016G09Rik
RIKEN cDNA 2900016G09 gene
11
72859
Mm.227464
3010026O09Rik
RIKEN cDNA 3010026O09 gene
11
68067
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAGCTTCCTC
(
4
)
26.1
0.0261
Cb medulloblastoma
TAGCTTCCTC
(
4
)
53.2
0.0532
P8 GC+1d culture
TAGCTTCCTC
(
4
)
99.3
0.0993
P8 GC+1d culture
AATTCTCCAT
(
4
)
2.3
0.0023
P8 GC+1d culture
GGGACTCCTC
(
3
)
1.1
0.0011
P8 GC+1d culture
TCCAAAAGCT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TAGCTTCCTC
(
4
)
57.4
0.0574
P8 GC+SHH+1d culture
AGGAGAGTTT
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
TCCAAAAGCT
(
2
)
1.2
0.0012
3T3 fibroblasts
TAGCTTCCTC
(
4
)
10.5
0.0105
3T3 fibroblasts
GGGACTCCTC
(
3
)
3.5
0.0035
3T3 fibroblasts
TAGCTTCCTT
(
2
)
3.5
0.0035
E15 cortex
TAGCTTCCTC
(
4
)
9.9
0.0099
P1 cortex
TAGCTTCCTC
(
4
)
22.7
0.0227
Hypothalamus
TAGCTTCCTC
(
4
)
67
0.067
Hypothalamus
TCCAAAAGCT
(
2
)
3.6
0.0036
Hypothalamus
AATTCTCCAT
(
4
)
1.8
0.0018
Hypothalamus
TAGCTTCCTT
(
2
)
1.8
0.0018
E12.5 retina
TAGCTTCCTC
(
4
)
9.4
0.0094
E12.5 retina
AGGAGAGTTT
(
4
)
1.9
0.0019
E14.5 retina
TAGCTTCCTC
(
4
)
12.8
0.0128
E14.5 retina
TCCAAAAGCT
(
2
)
1.8
0.0018
E16.5 retina
TAGCTTCCTC
(
4
)
16.3
0.0163
E16.5 retina
TCCAAAAGCT
(
2
)
1.8
0.0018
E18.5 retina
TAGCTTCCTC
(
4
)
25.5
0.0255
E18.5 retina
TCCAAAAGCT
(
2
)
3.6
0.0036
P0.5 retina
TAGCTTCCTC
(
4
)
23.6
0.0236
P2.5 retina
TAGCTTCCTC
(
4
)
31.7
0.0317
P4.5 retina
TAGCTTCCTC
(
4
)
45.6
0.0456
P4.5 retina
AGACCTTGTT
(
2
)
2
0.002
P4.5 retina
TCCAAAAGCT
(
2
)
2
0.002
P6.5 retina
TAGCTTCCTC
(
4
)
35
0.035
P6.5 retina
AGACCTTGTT
(
2
)
1.7
0.0017
P10.5 crx- retina
TAGCTTCCTC
(
4
)
46.4
0.0464
P10.5 crx- retina
AGACCTTGTT
(
2
)
1.9
0.0019
P10.5 crx- retina
AGGAGAGTTT
(
4
)
1.9
0.0019
P10.5 crx- retina
TAGCTTCCTT
(
2
)
1.9
0.0019
P10.5 crx+ retina
TAGCTTCCTC
(
4
)
15.4
0.0154
P10.5 crx+ retina
TCCAAAAGCT
(
2
)
5.8
0.0058
P10.5 crx+ retina
GGGACTCCTC
(
3
)
1.9
0.0019
Adult retinal
TAGCTTCCTC
(
4
)
25.9
0.0259
Adult retinal
AGGAGAGTTT
(
4
)
1.9
0.0019
Adult retinal
TAGCTTCCTT
(
2
)
1.9
0.0019
Adult retinal
TCCAAAAGCT
(
2
)
1.9
0.0019
ONL
TAGCTTCCTC
(
4
)
21.1
0.0211
