Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.227484
D030041H20Rik
RIKEN cDNA D030041H20 gene
14
320036
Mm.227484
C130026E14
hypothetical protein C130026E14
14
328364
Mm.227484
BC065120
cDNA sequence BC065120
14
328365
Human Homolog
RAI17[retinoic acid induced 17]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 46 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATCACAGGTG
(
4
)
3.3
0.0033
P8 Cb GC
AGTCCCATCT
(
3
)
1.6
0.0016
P8 Cb GC
TTAATTTTTT
(
3
)
1.6
0.0016
Cb medulloblastoma
ATATCAAAAA
(
4
)
2.3
0.0023
Cb medulloblastoma
TTAATTTTTT
(
3
)
2.3
0.0023
P8 GC+1d culture
TTAATTTTTT
(
3
)
9.1
0.0091
P8 GC+1d culture
ATCACAGGTG
(
4
)
4.6
0.0046
P8 GC+1d culture
TCAACAAGAT
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TTAATTTTTT
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
ATCACAGGTG
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
TACTATTTAC
(
3
)
1.2
0.0012
3T3 fibroblasts
CACACAGTGC
(
4
)
3.5
0.0035
E15 cortex
AGTCCCATCT
(
3
)
14.8
0.0148
Hypothalamus
ATATCAAAAA
(
4
)
1.8
0.0018
Hypothalamus
TCAACAAGAT
(
3
)
1.8
0.0018
Hypothalamus
TTAATTTTTT
(
3
)
1.8
0.0018
E12.5 retina
ATCACAGGTG
(
4
)
1.9
0.0019
E12.5 retina
TTAATTTTTT
(
3
)
1.9
0.0019
E14.5 retina
ATCACAGGTG
(
4
)
3.6
0.0036
E14.5 retina
TTAATTTTTT
(
3
)
3.6
0.0036
E14.5 retina
AGCAAATGAG
(
3
)
1.8
0.0018
E14.5 retina
TCAACAAGAT
(
3
)
1.8
0.0018
E16.5 retina
TACTATTTAC
(
3
)
3.6
0.0036
E16.5 retina
ATCACAGGTG
(
4
)
1.8
0.0018
E16.5 retina
CCGGAACCTT
(
3
)
1.8
0.0018
E18.5 retina
TTAATTTTTT
(
3
)
7.3
0.0073
E18.5 retina
ATCACAGGTG
(
4
)
5.5
0.0055
E18.5 retina
CACACAGTGC
(
4
)
1.8
0.0018
P0.5 retina
ATCACAGGTG
(
4
)
3.9
0.0039
P0.5 retina
CCGGAACCTT
(
3
)
2
0.002
P2.5 retina
ATCACAGGTG
(
4
)
3.5
0.0035
P2.5 retina
GGGGTCAGAT
(
3
)
1.8
0.0018
P2.5 retina
TCAACAAGAT
(
3
)
1.8
0.0018
P2.5 retina
TTAATTTTTT
(
3
)
1.8
0.0018
P4.5 retina
TTAATTTTTT
(
3
)
7.9
0.0079
P6.5 retina
ATATCAAAAA
(
4
)
1.7
0.0017
P6.5 retina
CCGGAACCTT
(
3
)
1.7
0.0017
P6.5 retina
TTAATTTTTT
(
3
)
1.7
0.0017
P10.5 crx- retina
ATCACAGGTG
(
4
)
3.7
0.0037
P10.5 crx- retina
GCAGTATGTT
(
3
)
3.7
0.0037
P10.5 crx- retina
AGCAAATGAG
(
3
)
1.9
0.0019
P10.5 crx+ retina
CACACAGTGC
(
4
)
1.9
0.0019
P10.5 crx+ retina
GCAGTATGTT
(
3
)
1.9
0.0019
P10.5 crx+ retina
TTAATTTTTT
(
3
)
1.9
0.0019
Adult retinal
GGGGTCAGAT
(
3
)
3.7
0.0037
Adult retinal
AGCAAATGAG
(
3
)
1.9
0.0019
